* installing to library ‘/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages’ * installing *source* package ‘bcv’ ... ** package ‘bcv’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘gcc-13 (Debian 13.2.0-23) 13.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmp5VSh0Q/R.INSTALLb168a762b882a/bcv/src' gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c bcv-matrix-private.c -o bcv-matrix-private.o bcv-matrix-private.c: In function ‘_bcv_matrix_set_indices’: bcv-matrix-private.c:126:31: warning: variable ‘n’ set but not used [-Wunused-but-set-variable] 126 | bcv_index_t idx, i, j, m, n, lda; | ^ bcv-matrix-private.c: In function ‘_bcv_blas_dgemm’: bcv-matrix-private.c:315:26: warning: variable ‘k2’ set but not used [-Wunused-but-set-variable] 315 | bcv_index_t m, n, k, k2; | ^~ gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c bcv-partition.c -o bcv-partition.o bcv-partition.c: In function ‘bcv_partition_get_perm’: bcv-partition.c:76:30: warning: variable ‘k’ set but not used [-Wunused-but-set-variable] 76 | bcv_index_t i, m, mc, n, k, *sets; | ^ bcv-partition.c: In function ‘bcv_partition_get_size’: bcv-partition.c:142:30: warning: variable ‘k’ set but not used [-Wunused-but-set-variable] 142 | bcv_index_t size = 0, n, k; | ^ gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c bcv-svd-gabriel-rep.c -o bcv-svd-gabriel-rep.o gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c bcv-svd-gabriel.c -o bcv-svd-gabriel.o gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c bcv-svd-impute.c -o bcv-svd-impute.o bcv-svd-impute.c: In function ‘bcv_svd_col_mean_impute’: bcv-svd-impute.c:262:23: warning: variable ‘i’ set but not used [-Wunused-but-set-variable] 262 | bcv_index_t m, n, i, j, idx, incmu; | ^ gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c bcv-svd-wold-rep.c -o bcv-svd-wold-rep.o gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c bcv-svd-wold.c -o bcv-svd-wold.o gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c bcv-vector-private.c -o bcv-vector-private.o gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c bcv_init.c -o bcv_init.o gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c r-cv-svd-gabriel.c -o r-cv-svd-gabriel.o gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c r-cv-svd-wold.c -o r-cv-svd-wold.o gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c r-impute-svd.c -o r-impute-svd.o r-impute-svd.c: In function ‘bcv_count_missing’: r-impute-svd.c:86:26: warning: variable ‘lda’ set but not used [-Wunused-but-set-variable] 86 | bcv_index_t i, m, n, lda, result = 0; | ^~~ r-impute-svd.c: In function ‘bcv_find_missing’: r-impute-svd.c:112:26: warning: variable ‘lda’ set but not used [-Wunused-but-set-variable] 112 | bcv_index_t i, m, n, lda; | ^~~ gcc-13 -shared -L/home/hornik/tmp/R.check/r-devel-gcc/Work/build/lib -Wl,-O1 -o bcv.so bcv-matrix-private.o bcv-partition.o bcv-svd-gabriel-rep.o bcv-svd-gabriel.o bcv-svd-impute.o bcv-svd-wold-rep.o bcv-svd-wold.o bcv-vector-private.o bcv_init.o r-cv-svd-gabriel.o r-cv-svd-wold.o r-impute-svd.o -llapack -L/home/hornik/tmp/R.check/r-devel-gcc/Work/build/lib -lRblas -lgfortran -lm -lquadmath -L/home/hornik/tmp/R.check/r-devel-gcc/Work/build/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmp5VSh0Q/R.INSTALLb168a762b882a/bcv/src' make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmp5VSh0Q/R.INSTALLb168a762b882a/bcv/src' make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmp5VSh0Q/R.INSTALLb168a762b882a/bcv/src' installing to /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/00LOCK-bcv/00new/bcv/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * creating tarball packaged installation of ‘bcv’ as ‘bcv_1.0.2_R_x86_64-pc-linux-gnu.tar.gz’ * DONE (bcv)