* installing to library ‘/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages’ * installing *source* package ‘VIC5’ ... ** package ‘VIC5’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘g++-13 (Debian 13.2.0-23) 13.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmp3bhV2C/R.INSTALL17ed44304f6ff8/VIC5/src' gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I "./vic/vic_run/include" -I "./vic/drivers/shared_all/include" -I "." -DLOG_LVL=25 -D_DEFAULT_SOURCE -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vic/vic_run/src/advected_sensible_heat.c -o vic/vic_run/src/advected_sensible_heat.o gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I "./vic/vic_run/include" -I "./vic/drivers/shared_all/include" -I "." -DLOG_LVL=25 -D_DEFAULT_SOURCE -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vic/vic_run/src/alloc_and_free.c -o vic/vic_run/src/alloc_and_free.o gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I "./vic/vic_run/include" -I "./vic/drivers/shared_all/include" -I "." -DLOG_LVL=25 -D_DEFAULT_SOURCE -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vic/vic_run/src/arno_evap.c -o vic/vic_run/src/arno_evap.o gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I "./vic/vic_run/include" -I "./vic/drivers/shared_all/include" -I "." -DLOG_LVL=25 -D_DEFAULT_SOURCE -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vic/vic_run/src/calc_atmos_energy_bal.c -o vic/vic_run/src/calc_atmos_energy_bal.o gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I "./vic/vic_run/include" -I "./vic/drivers/shared_all/include" -I "." -DLOG_LVL=25 -D_DEFAULT_SOURCE -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vic/vic_run/src/calc_gridcell_avg_albedo.c -o vic/vic_run/src/calc_gridcell_avg_albedo.o gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I "./vic/vic_run/include" -I "./vic/drivers/shared_all/include" -I "." -DLOG_LVL=25 -D_DEFAULT_SOURCE -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vic/vic_run/src/calc_Nscale_factors.c -o vic/vic_run/src/calc_Nscale_factors.o gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I "./vic/vic_run/include" -I "./vic/drivers/shared_all/include" -I "." -DLOG_LVL=25 -D_DEFAULT_SOURCE -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vic/vic_run/src/calc_rainonly.c -o vic/vic_run/src/calc_rainonly.o gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I "./vic/vic_run/include" -I "./vic/drivers/shared_all/include" -I "." -DLOG_LVL=25 -D_DEFAULT_SOURCE -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vic/vic_run/src/calc_snow_coverage.c -o vic/vic_run/src/calc_snow_coverage.o gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I "./vic/vic_run/include" -I "./vic/drivers/shared_all/include" -I "." -DLOG_LVL=25 -D_DEFAULT_SOURCE -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vic/vic_run/src/calc_surf_energy_bal.c -o vic/vic_run/src/calc_surf_energy_bal.o gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I "./vic/vic_run/include" -I "./vic/drivers/shared_all/include" -I "." -DLOG_LVL=25 -D_DEFAULT_SOURCE -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vic/vic_run/src/calc_veg_params.c -o vic/vic_run/src/calc_veg_params.o gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I "./vic/vic_run/include" -I "./vic/drivers/shared_all/include" -I "." -DLOG_LVL=25 -D_DEFAULT_SOURCE -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vic/vic_run/src/CalcAerodynamic.c -o vic/vic_run/src/CalcAerodynamic.o gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I "./vic/vic_run/include" -I "./vic/drivers/shared_all/include" -I "." -DLOG_LVL=25 -D_DEFAULT_SOURCE -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vic/vic_run/src/CalcBlowingSnow.c -o vic/vic_run/src/CalcBlowingSnow.o gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I "./vic/vic_run/include" -I "./vic/drivers/shared_all/include" -I "." -DLOG_LVL=25 -D_DEFAULT_SOURCE -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vic/vic_run/src/canopy_assimilation.c -o vic/vic_run/src/canopy_assimilation.o gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I "./vic/vic_run/include" -I "./vic/drivers/shared_all/include" -I "." -DLOG_LVL=25 -D_DEFAULT_SOURCE -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vic/vic_run/src/canopy_evap.c -o vic/vic_run/src/canopy_evap.o gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I "./vic/vic_run/include" -I "./vic/drivers/shared_all/include" -I "." -DLOG_LVL=25 -D_DEFAULT_SOURCE -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vic/vic_run/src/comparisons.c -o vic/vic_run/src/comparisons.o gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I "./vic/vic_run/include" -I "./vic/drivers/shared_all/include" -I "." -DLOG_LVL=25 -D_DEFAULT_SOURCE -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vic/vic_run/src/compute_coszen.c -o vic/vic_run/src/compute_coszen.o gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I "./vic/vic_run/include" -I "./vic/drivers/shared_all/include" -I "." -DLOG_LVL=25 -D_DEFAULT_SOURCE -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vic/vic_run/src/compute_derived_lake_dimensions.c -o vic/vic_run/src/compute_derived_lake_dimensions.o gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I "./vic/vic_run/include" -I "./vic/drivers/shared_all/include" -I "." -DLOG_LVL=25 -D_DEFAULT_SOURCE -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vic/vic_run/src/compute_pot_evap.c -o vic/vic_run/src/compute_pot_evap.o gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I "./vic/vic_run/include" -I "./vic/drivers/shared_all/include" -I "." -DLOG_LVL=25 -D_DEFAULT_SOURCE -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vic/vic_run/src/compute_soil_resp.c -o vic/vic_run/src/compute_soil_resp.o gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I "./vic/vic_run/include" -I "./vic/drivers/shared_all/include" -I "." -DLOG_LVL=25 -D_DEFAULT_SOURCE -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vic/vic_run/src/compute_zwt.c -o vic/vic_run/src/compute_zwt.o gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I "./vic/vic_run/include" -I "./vic/drivers/shared_all/include" -I "." -DLOG_LVL=25 -D_DEFAULT_SOURCE -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vic/vic_run/src/correct_precip.c -o vic/vic_run/src/correct_precip.o gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I "./vic/vic_run/include" -I "./vic/drivers/shared_all/include" -I "." -DLOG_LVL=25 -D_DEFAULT_SOURCE -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vic/vic_run/src/estimate_T1.c -o vic/vic_run/src/estimate_T1.o gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I "./vic/vic_run/include" -I "./vic/drivers/shared_all/include" -I "." -DLOG_LVL=25 -D_DEFAULT_SOURCE -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vic/vic_run/src/faparl.c -o vic/vic_run/src/faparl.o gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I "./vic/vic_run/include" -I "./vic/drivers/shared_all/include" -I "." -DLOG_LVL=25 -D_DEFAULT_SOURCE -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vic/vic_run/src/frozen_soil.c -o vic/vic_run/src/frozen_soil.o vic/vic_run/src/frozen_soil.c: In function ‘fda_heat_eqn’: vic/vic_run/src/frozen_soil.c:704:5: warning: multi-line comment [-Wcomment] 704 | //#pragma omp threadprivate(deltat, NOFLUX, EXP_TRANS, T0, moist, ice, \ | ^ gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I "./vic/vic_run/include" -I "./vic/drivers/shared_all/include" -I "." -DLOG_LVL=25 -D_DEFAULT_SOURCE -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vic/vic_run/src/func_atmos_energy_bal.c -o vic/vic_run/src/func_atmos_energy_bal.o gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I "./vic/vic_run/include" -I "./vic/drivers/shared_all/include" -I "." -DLOG_LVL=25 -D_DEFAULT_SOURCE -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vic/vic_run/src/func_atmos_moist_bal.c -o vic/vic_run/src/func_atmos_moist_bal.o gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I "./vic/vic_run/include" -I "./vic/drivers/shared_all/include" -I "." -DLOG_LVL=25 -D_DEFAULT_SOURCE -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vic/vic_run/src/func_canopy_energy_bal.c -o vic/vic_run/src/func_canopy_energy_bal.o gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I "./vic/vic_run/include" -I "./vic/drivers/shared_all/include" -I "." -DLOG_LVL=25 -D_DEFAULT_SOURCE -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vic/vic_run/src/func_surf_energy_bal.c -o vic/vic_run/src/func_surf_energy_bal.o gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I "./vic/vic_run/include" -I "./vic/drivers/shared_all/include" -I "." -DLOG_LVL=25 -D_DEFAULT_SOURCE -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vic/vic_run/src/ice_melt.c -o vic/vic_run/src/ice_melt.o gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I "./vic/vic_run/include" -I "./vic/drivers/shared_all/include" -I "." -DLOG_LVL=25 -D_DEFAULT_SOURCE -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vic/vic_run/src/IceEnergyBalance.c -o vic/vic_run/src/IceEnergyBalance.o gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I "./vic/vic_run/include" -I "./vic/drivers/shared_all/include" -I "." -DLOG_LVL=25 -D_DEFAULT_SOURCE -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vic/vic_run/src/initialize_lake.c -o vic/vic_run/src/initialize_lake.o gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I "./vic/vic_run/include" -I "./vic/drivers/shared_all/include" -I "." -DLOG_LVL=25 -D_DEFAULT_SOURCE -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vic/vic_run/src/interpoloation.c -o vic/vic_run/src/interpoloation.o gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I "./vic/vic_run/include" -I "./vic/drivers/shared_all/include" -I "." -DLOG_LVL=25 -D_DEFAULT_SOURCE -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vic/vic_run/src/lake_utils.c -o vic/vic_run/src/lake_utils.o gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I "./vic/vic_run/include" -I "./vic/drivers/shared_all/include" -I "." -DLOG_LVL=25 -D_DEFAULT_SOURCE -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vic/vic_run/src/lakes.eb.c -o vic/vic_run/src/lakes.eb.o vic/vic_run/src/lakes.eb.c: In function ‘water_balance’: vic/vic_run/src/lakes.eb.c:2179:23: warning: ‘k’ may be used uninitialized [-Wmaybe-uninitialized] 2179 | lake->temp[k] = all_vars->energy[iveg][band].Tsurf; | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ vic/vic_run/src/lakes.eb.c:1833:35: note: ‘k’ was declared here 1833 | size_t j, k, frost_area; | ^ gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I "./vic/vic_run/include" -I "./vic/drivers/shared_all/include" -I "." -DLOG_LVL=25 -D_DEFAULT_SOURCE -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vic/vic_run/src/latent_heat_from_snow.c -o vic/vic_run/src/latent_heat_from_snow.o gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I "./vic/vic_run/include" -I "./vic/drivers/shared_all/include" -I "." -DLOG_LVL=25 -D_DEFAULT_SOURCE -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vic/vic_run/src/massrelease.c -o vic/vic_run/src/massrelease.o gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I "./vic/vic_run/include" -I "./vic/drivers/shared_all/include" -I "." -DLOG_LVL=25 -D_DEFAULT_SOURCE -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vic/vic_run/src/newt_raph_func_fast.c -o vic/vic_run/src/newt_raph_func_fast.o gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I "./vic/vic_run/include" -I "./vic/drivers/shared_all/include" -I "." -DLOG_LVL=25 -D_DEFAULT_SOURCE -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vic/vic_run/src/penman.c -o vic/vic_run/src/penman.o gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I "./vic/vic_run/include" -I "./vic/drivers/shared_all/include" -I "." -DLOG_LVL=25 -D_DEFAULT_SOURCE -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vic/vic_run/src/photosynth.c -o vic/vic_run/src/photosynth.o vic/vic_run/src/photosynth.c: In function ‘photosynth’: vic/vic_run/src/photosynth.c:388:12: warning: ‘r0’ may be used uninitialized [-Wmaybe-uninitialized] 388 | if (r0 > 1.e6) { | ^ vic/vic_run/src/photosynth.c:71:30: note: ‘r0’ was declared here 71 | double r0; | ^~ gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I "./vic/vic_run/include" -I "./vic/drivers/shared_all/include" -I "." -DLOG_LVL=25 -D_DEFAULT_SOURCE -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vic/vic_run/src/physics.c -o vic/vic_run/src/physics.o gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I "./vic/vic_run/include" -I "./vic/drivers/shared_all/include" -I "." -DLOG_LVL=25 -D_DEFAULT_SOURCE -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vic/vic_run/src/prepare_full_energy.c -o vic/vic_run/src/prepare_full_energy.o gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I "./vic/vic_run/include" -I "./vic/drivers/shared_all/include" -I "." -DLOG_LVL=25 -D_DEFAULT_SOURCE -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vic/vic_run/src/root_brent.c -o vic/vic_run/src/root_brent.o vic/vic_run/src/root_brent.c: In function ‘root_brent’: vic/vic_run/src/root_brent.c:219:34: warning: ‘last_bad’ may be used uninitialized [-Wmaybe-uninitialized] 219 | c = 0.5 * (last_good + last_bad); | ~~~~~~~~~~~^~~~~~~~~~~ vic/vic_run/src/root_brent.c:94:30: note: ‘last_bad’ was declared here 94 | double last_bad; | ^~~~~~~~ vic/vic_run/src/root_brent.c:294:17: warning: ‘e’ may be used uninitialized [-Wmaybe-uninitialized] 294 | if (fabs(e) < tol || fabs(fa) <= fabs(fb)) { | ^~~~~~~ vic/vic_run/src/root_brent.c:84:30: note: ‘e’ was declared here 84 | double e; | ^ vic/vic_run/src/root_brent.c:287:22: warning: ‘c’ may be used uninitialized [-Wmaybe-uninitialized] 287 | m = 0.5 * (c - b); | ~~~^~~~ vic/vic_run/src/root_brent.c:82:30: note: ‘c’ was declared here 82 | double c; | ^ gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I "./vic/vic_run/include" -I "./vic/drivers/shared_all/include" -I "." -DLOG_LVL=25 -D_DEFAULT_SOURCE -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vic/vic_run/src/runoff.c -o vic/vic_run/src/runoff.o gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I "./vic/vic_run/include" -I "./vic/drivers/shared_all/include" -I "." -DLOG_LVL=25 -D_DEFAULT_SOURCE -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vic/vic_run/src/snow_intercept.c -o vic/vic_run/src/snow_intercept.o gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I "./vic/vic_run/include" -I "./vic/drivers/shared_all/include" -I "." -DLOG_LVL=25 -D_DEFAULT_SOURCE -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vic/vic_run/src/snow_melt.c -o vic/vic_run/src/snow_melt.o gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I "./vic/vic_run/include" -I "./vic/drivers/shared_all/include" -I "." -DLOG_LVL=25 -D_DEFAULT_SOURCE -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vic/vic_run/src/snow_utility.c -o vic/vic_run/src/snow_utility.o gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I "./vic/vic_run/include" -I "./vic/drivers/shared_all/include" -I "." -DLOG_LVL=25 -D_DEFAULT_SOURCE -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vic/vic_run/src/SnowPackEnergyBalance.c -o vic/vic_run/src/SnowPackEnergyBalance.o gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I "./vic/vic_run/include" -I "./vic/drivers/shared_all/include" -I "." -DLOG_LVL=25 -D_DEFAULT_SOURCE -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vic/vic_run/src/soil_carbon_balance.c -o vic/vic_run/src/soil_carbon_balance.o gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I "./vic/vic_run/include" -I "./vic/drivers/shared_all/include" -I "." -DLOG_LVL=25 -D_DEFAULT_SOURCE -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vic/vic_run/src/soil_conduction.c -o vic/vic_run/src/soil_conduction.o gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I "./vic/vic_run/include" -I "./vic/drivers/shared_all/include" -I "." -DLOG_LVL=25 -D_DEFAULT_SOURCE -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vic/vic_run/src/soil_thermal_eqn.c -o vic/vic_run/src/soil_thermal_eqn.o gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I "./vic/vic_run/include" -I "./vic/drivers/shared_all/include" -I "." -DLOG_LVL=25 -D_DEFAULT_SOURCE -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vic/vic_run/src/solve_snow.c -o vic/vic_run/src/solve_snow.o gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I "./vic/vic_run/include" -I "./vic/drivers/shared_all/include" -I "." -DLOG_LVL=25 -D_DEFAULT_SOURCE -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vic/vic_run/src/StabilityCorrection.c -o vic/vic_run/src/StabilityCorrection.o gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I "./vic/vic_run/include" -I "./vic/drivers/shared_all/include" -I "." -DLOG_LVL=25 -D_DEFAULT_SOURCE -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vic/vic_run/src/surface_fluxes.c -o vic/vic_run/src/surface_fluxes.o gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I "./vic/vic_run/include" -I "./vic/drivers/shared_all/include" -I "." -DLOG_LVL=25 -D_DEFAULT_SOURCE -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vic/vic_run/src/svp.c -o vic/vic_run/src/svp.o gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I "./vic/vic_run/include" -I "./vic/drivers/shared_all/include" -I "." -DLOG_LVL=25 -D_DEFAULT_SOURCE -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vic/vic_run/src/vic_run.c -o vic/vic_run/src/vic_run.o vic/vic_run/src/vic_run.c: In function ‘vic_run’: vic/vic_run/src/vic_run.c:380:5: warning: ‘overstory’ may be used uninitialized [-Wmaybe-uninitialized] 380 | calc_gridcell_avg_albedo(&all_vars->gridcell_avg.avg_albedo, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 381 | force->shortwave[NR], Nveg, overstory, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 | all_vars->energy, all_vars->snow, veg_con, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 | soil_con); | ~~~~~~~~~ vic/vic_run/src/vic_run.c:54:30: note: ‘overstory’ was declared here 54 | char overstory; | ^~~~~~~~~ vic/vic_run/src/vic_run.c:402:30: warning: ‘lakefrac’ may be used uninitialized [-Wmaybe-uninitialized] 402 | Cv *= (1 - lakefrac); | ~~~^~~~~~~~~~~ vic/vic_run/src/vic_run.c:88:30: note: ‘lakefrac’ was declared here 88 | double lakefrac; | ^~~~~~~~ vic/vic_run/src/vic_run.c:462:21: warning: ‘fraci’ may be used uninitialized [-Wmaybe-uninitialized] 462 | ErrorFlag = solve_lake(snowprec, rainprec, force->air_temp[NR], | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 463 | force->wind[NR], force->vp[NR] / PA_PER_KPA, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 464 | force->shortwave[NR], force->longwave[NR], | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 465 | force->vpd[NR] / PA_PER_KPA, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 466 | force->pressure[NR] / PA_PER_KPA, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 467 | force->density[NR], lake_var, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 468 | *soil_con, gp->dt, gp->wind_h, *dmy, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 469 | fraci); | ~~~~~~ vic/vic_run/src/vic_run.c:89:30: note: ‘fraci’ was declared here 89 | double fraci; | ^~~~~ gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I "./vic/vic_run/include" -I "./vic/drivers/shared_all/include" -I "." -DLOG_LVL=25 -D_DEFAULT_SOURCE -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vic/vic_run/src/water_energy_balance.c -o vic/vic_run/src/water_energy_balance.o gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I "./vic/vic_run/include" -I "./vic/drivers/shared_all/include" -I "." -DLOG_LVL=25 -D_DEFAULT_SOURCE -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vic/vic_run/src/water_under_ice.c -o vic/vic_run/src/water_under_ice.o gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I "./vic/vic_run/include" -I "./vic/drivers/shared_all/include" -I "." -DLOG_LVL=25 -D_DEFAULT_SOURCE -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vic/vic_run/src/write_layer.c -o vic/vic_run/src/write_layer.o gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I "./vic/vic_run/include" -I "./vic/drivers/shared_all/include" -I "." -DLOG_LVL=25 -D_DEFAULT_SOURCE -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vic/vic_run/src/write_vegvar.c -o vic/vic_run/src/write_vegvar.o gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I "./vic/vic_run/include" -I "./vic/drivers/shared_all/include" -I "." -DLOG_LVL=25 -D_DEFAULT_SOURCE -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vic/drivers/shared_all/src/agg_data.c -o vic/drivers/shared_all/src/agg_data.o gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I "./vic/vic_run/include" -I "./vic/drivers/shared_all/include" -I "." -DLOG_LVL=25 -D_DEFAULT_SOURCE -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vic/drivers/shared_all/src/alarms.c -o vic/drivers/shared_all/src/alarms.o gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I "./vic/vic_run/include" -I "./vic/drivers/shared_all/include" -I "." -DLOG_LVL=25 -D_DEFAULT_SOURCE -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vic/drivers/shared_all/src/calc_root_fraction.c -o vic/drivers/shared_all/src/calc_root_fraction.o gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I "./vic/vic_run/include" -I "./vic/drivers/shared_all/include" -I "." -DLOG_LVL=25 -D_DEFAULT_SOURCE -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vic/drivers/shared_all/src/cmd_proc.c -o vic/drivers/shared_all/src/cmd_proc.o gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I "./vic/vic_run/include" -I "./vic/drivers/shared_all/include" -I "." -DLOG_LVL=25 -D_DEFAULT_SOURCE -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vic/drivers/shared_all/src/compress_files.c -o vic/drivers/shared_all/src/compress_files.o vic/drivers/shared_all/src/compress_files.c: In function ‘compress_files’: vic/drivers/shared_all/src/compress_files.c:49:9: warning: unused variable ‘status’ [-Wunused-variable] 49 | int status = system(command); | ^~~~~~ gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I "./vic/vic_run/include" -I "./vic/drivers/shared_all/include" -I "." -DLOG_LVL=25 -D_DEFAULT_SOURCE -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vic/drivers/shared_all/src/compute_derived_state_vars.c -o vic/drivers/shared_all/src/compute_derived_state_vars.o gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I "./vic/vic_run/include" -I "./vic/drivers/shared_all/include" -I "." -DLOG_LVL=25 -D_DEFAULT_SOURCE -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vic/drivers/shared_all/src/compute_lake_params.c -o vic/drivers/shared_all/src/compute_lake_params.o gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I "./vic/vic_run/include" -I "./vic/drivers/shared_all/include" -I "." -DLOG_LVL=25 -D_DEFAULT_SOURCE -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vic/drivers/shared_all/src/compute_treeline.c -o vic/drivers/shared_all/src/compute_treeline.o gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I "./vic/vic_run/include" -I "./vic/drivers/shared_all/include" -I "." -DLOG_LVL=25 -D_DEFAULT_SOURCE -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vic/drivers/shared_all/src/forcing_utils.c -o vic/drivers/shared_all/src/forcing_utils.o vic/drivers/shared_all/src/forcing_utils.c: In function ‘count_force_vars’: vic/drivers/shared_all/src/forcing_utils.c:134:19: warning: variable ‘status’ set but not used [-Wunused-but-set-variable] 134 | char* status; | ^~~~~~ gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I "./vic/vic_run/include" -I "./vic/drivers/shared_all/include" -I "." -DLOG_LVL=25 -D_DEFAULT_SOURCE -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vic/drivers/shared_all/src/free_all_vars.c -o vic/drivers/shared_all/src/free_all_vars.o gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I "./vic/vic_run/include" -I "./vic/drivers/shared_all/include" -I "." -DLOG_LVL=25 -D_DEFAULT_SOURCE -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vic/drivers/shared_all/src/free_vegcon.c -o vic/drivers/shared_all/src/free_vegcon.o gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I "./vic/vic_run/include" -I "./vic/drivers/shared_all/include" -I "." -DLOG_LVL=25 -D_DEFAULT_SOURCE -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vic/drivers/shared_all/src/generate_default_lake_state.c -o vic/drivers/shared_all/src/generate_default_lake_state.o gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I "./vic/vic_run/include" -I "./vic/drivers/shared_all/include" -I "." -DLOG_LVL=25 -D_DEFAULT_SOURCE -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vic/drivers/shared_all/src/generate_default_state.c -o vic/drivers/shared_all/src/generate_default_state.o gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I "./vic/vic_run/include" -I "./vic/drivers/shared_all/include" -I "." -DLOG_LVL=25 -D_DEFAULT_SOURCE -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vic/drivers/shared_all/src/get_parameters.c -o vic/drivers/shared_all/src/get_parameters.o vic/drivers/shared_all/src/get_parameters.c: In function ‘get_parameters’: vic/drivers/shared_all/src/get_parameters.c:37:30: warning: variable ‘status’ set but not used [-Wunused-but-set-variable] 37 | char* status; | ^~~~~~ gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I "./vic/vic_run/include" -I "./vic/drivers/shared_all/include" -I "." -DLOG_LVL=25 -D_DEFAULT_SOURCE -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vic/drivers/shared_all/src/history_metadata.c -o vic/drivers/shared_all/src/history_metadata.o gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I "./vic/vic_run/include" -I "./vic/drivers/shared_all/include" -I "." -DLOG_LVL=25 -D_DEFAULT_SOURCE -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vic/drivers/shared_all/src/initialize_energy.c -o vic/drivers/shared_all/src/initialize_energy.o gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I "./vic/vic_run/include" -I "./vic/drivers/shared_all/include" -I "." -DLOG_LVL=25 -D_DEFAULT_SOURCE -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vic/drivers/shared_all/src/initialize_global.c -o vic/drivers/shared_all/src/initialize_global.o gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I "./vic/vic_run/include" -I "./vic/drivers/shared_all/include" -I "." -DLOG_LVL=25 -D_DEFAULT_SOURCE -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vic/drivers/shared_all/src/initialize_options.c -o vic/drivers/shared_all/src/initialize_options.o gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I "./vic/vic_run/include" -I "./vic/drivers/shared_all/include" -I "." -DLOG_LVL=25 -D_DEFAULT_SOURCE -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vic/drivers/shared_all/src/initialize_parameters.c -o vic/drivers/shared_all/src/initialize_parameters.o gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I "./vic/vic_run/include" -I "./vic/drivers/shared_all/include" -I "." -DLOG_LVL=25 -D_DEFAULT_SOURCE -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vic/drivers/shared_all/src/initialize_snow.c -o vic/drivers/shared_all/src/initialize_snow.o gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I "./vic/vic_run/include" -I "./vic/drivers/shared_all/include" -I "." -DLOG_LVL=25 -D_DEFAULT_SOURCE -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vic/drivers/shared_all/src/initialize_soil.c -o vic/drivers/shared_all/src/initialize_soil.o gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I "./vic/vic_run/include" -I "./vic/drivers/shared_all/include" -I "." -DLOG_LVL=25 -D_DEFAULT_SOURCE -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vic/drivers/shared_all/src/initialize_veg.c -o vic/drivers/shared_all/src/initialize_veg.o gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I "./vic/vic_run/include" -I "./vic/drivers/shared_all/include" -I "." -DLOG_LVL=25 -D_DEFAULT_SOURCE -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vic/drivers/shared_all/src/input_tools.c -o vic/drivers/shared_all/src/input_tools.o vic/drivers/shared_all/src/input_tools.c: In function ‘count_nstreams_nvars’: vic/drivers/shared_all/src/input_tools.c:67:19: warning: variable ‘status’ set but not used [-Wunused-but-set-variable] 67 | char* status; | ^~~~~~ gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I "./vic/vic_run/include" -I "./vic/drivers/shared_all/include" -I "." -DLOG_LVL=25 -D_DEFAULT_SOURCE -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vic/drivers/shared_all/src/make_all_vars.c -o vic/drivers/shared_all/src/make_all_vars.o gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I "./vic/vic_run/include" -I "./vic/drivers/shared_all/include" -I "." -DLOG_LVL=25 -D_DEFAULT_SOURCE -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vic/drivers/shared_all/src/make_cell_data.c -o vic/drivers/shared_all/src/make_cell_data.o gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I "./vic/vic_run/include" -I "./vic/drivers/shared_all/include" -I "." -DLOG_LVL=25 -D_DEFAULT_SOURCE -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vic/drivers/shared_all/src/make_dmy.c -o vic/drivers/shared_all/src/make_dmy.o gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I "./vic/vic_run/include" -I "./vic/drivers/shared_all/include" -I "." -DLOG_LVL=25 -D_DEFAULT_SOURCE -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vic/drivers/shared_all/src/make_energy_bal.c -o vic/drivers/shared_all/src/make_energy_bal.o gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I "./vic/vic_run/include" -I "./vic/drivers/shared_all/include" -I "." -DLOG_LVL=25 -D_DEFAULT_SOURCE -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vic/drivers/shared_all/src/make_snow_data.c -o vic/drivers/shared_all/src/make_snow_data.o gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I "./vic/vic_run/include" -I "./vic/drivers/shared_all/include" -I "." -DLOG_LVL=25 -D_DEFAULT_SOURCE -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vic/drivers/shared_all/src/make_veg_var.c -o vic/drivers/shared_all/src/make_veg_var.o gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I "./vic/vic_run/include" -I "./vic/drivers/shared_all/include" -I "." -DLOG_LVL=25 -D_DEFAULT_SOURCE -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vic/drivers/shared_all/src/open_file.c -o vic/drivers/shared_all/src/open_file.o vic/drivers/shared_all/src/open_file.c: In function ‘open_file’: vic/drivers/shared_all/src/open_file.c:58:11: warning: variable ‘status’ set but not used [-Wunused-but-set-variable] 58 | char* status; | ^~~~~~ vic/drivers/shared_all/src/open_file.c:56:11: warning: unused variable ‘command’ [-Wunused-variable] 56 | command[MAXSTRING], | ^~~~~~~ gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I "./vic/vic_run/include" -I "./vic/drivers/shared_all/include" -I "." -DLOG_LVL=25 -D_DEFAULT_SOURCE -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vic/drivers/shared_all/src/print_library_shared.c -o vic/drivers/shared_all/src/print_library_shared.o gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I "./vic/vic_run/include" -I "./vic/drivers/shared_all/include" -I "." -DLOG_LVL=25 -D_DEFAULT_SOURCE -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vic/drivers/shared_all/src/put_data.c -o vic/drivers/shared_all/src/put_data.o gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I "./vic/vic_run/include" -I "./vic/drivers/shared_all/include" -I "." -DLOG_LVL=25 -D_DEFAULT_SOURCE -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vic/drivers/shared_all/src/set_output_defaults.c -o vic/drivers/shared_all/src/set_output_defaults.o gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I "./vic/vic_run/include" -I "./vic/drivers/shared_all/include" -I "." -DLOG_LVL=25 -D_DEFAULT_SOURCE -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vic/drivers/shared_all/src/soil_moisture_from_water_table.c -o vic/drivers/shared_all/src/soil_moisture_from_water_table.o gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I "./vic/vic_run/include" -I "./vic/drivers/shared_all/include" -I "." -DLOG_LVL=25 -D_DEFAULT_SOURCE -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vic/drivers/shared_all/src/timing.c -o vic/drivers/shared_all/src/timing.o gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I "./vic/vic_run/include" -I "./vic/drivers/shared_all/include" -I "." -DLOG_LVL=25 -D_DEFAULT_SOURCE -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vic/drivers/shared_all/src/update_step_vars.c -o vic/drivers/shared_all/src/update_step_vars.o gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I "./vic/vic_run/include" -I "./vic/drivers/shared_all/include" -I "." -DLOG_LVL=25 -D_DEFAULT_SOURCE -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vic/drivers/shared_all/src/vic_history.c -o vic/drivers/shared_all/src/vic_history.o gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I "./vic/vic_run/include" -I "./vic/drivers/shared_all/include" -I "." -DLOG_LVL=25 -D_DEFAULT_SOURCE -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vic/drivers/shared_all/src/vic_log.c -o vic/drivers/shared_all/src/vic_log.o vic/drivers/shared_all/src/vic_log.c: In function ‘finalize_logging’: vic/drivers/shared_all/src/vic_log.c:47:18: warning: unused variable ‘LOG_DEST’ [-Wunused-variable] 47 | extern FILE *LOG_DEST; | ^~~~~~~~ vic/drivers/shared_all/src/vic_log.c: In function ‘get_logname’: vic/drivers/shared_all/src/vic_log.c:93:11: warning: unused variable ‘prefix’ [-Wunused-variable] 93 | char *prefix = "vic.log."; | ^~~~~~ vic/drivers/shared_all/src/vic_log.c:92:11: warning: unused variable ‘ext’ [-Wunused-variable] 92 | char *ext = ".txt"; | ^~~ gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I "./vic/vic_run/include" -I "./vic/drivers/shared_all/include" -I "." -DLOG_LVL=25 -D_DEFAULT_SOURCE -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vic/drivers/shared_all/src/vic_time.c -o vic/drivers/shared_all/src/vic_time.o vic/drivers/shared_all/src/vic_time.c: In function ‘julian_day_from_dmy’: vic/drivers/shared_all/src/vic_time.c:131:8: warning: ‘B’ may be used uninitialized [-Wmaybe-uninitialized] 131 | jd += B; | ^~ vic/drivers/shared_all/src/vic_time.c:81:15: note: ‘B’ was declared here 81 | int A, B; | ^ vic/drivers/shared_all/src/vic_time.c: In function ‘date2num’: vic/drivers/shared_all/src/vic_time.c:553:16: warning: ‘jdelta’ may be used uninitialized [-Wmaybe-uninitialized] 553 | jdelta = jdelta + tzoffset / HOURS_PER_DAY; vic/drivers/shared_all/src/vic_time.c:513:12: note: ‘jdelta’ was declared here 513 | double jdelta; | ^~~~~~ vic/drivers/shared_all/src/vic_time.c: In function ‘dmy_julian_day’: vic/drivers/shared_all/src/vic_time.c:281:7: warning: ‘A’ may be used uninitialized [-Wmaybe-uninitialized] 281 | B = A + 1524; | ~~^~~~~~~~~~ vic/drivers/shared_all/src/vic_time.c:247:12: note: ‘A’ was declared here 247 | int A, B, C, D, E; | ^ vic/drivers/shared_all/src/vic_time.c: In function ‘num2date’: vic/drivers/shared_all/src/vic_time.c:593:17: warning: ‘jdelta’ may be used uninitialized [-Wmaybe-uninitialized] 593 | jd = jdelta + origin + small_offset; | ~~~~~~~^~~~~~~~ vic/drivers/shared_all/src/vic_time.c:574:16: note: ‘jdelta’ was declared here 574 | double jd, jdelta; | ^~~~~~ gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I "./vic/vic_run/include" -I "./vic/drivers/shared_all/include" -I "." -DLOG_LVL=25 -D_DEFAULT_SOURCE -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vic/drivers/shared_all/src/zero_output_list.c -o vic/drivers/shared_all/src/zero_output_list.o g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I "./vic/vic_run/include" -I "./vic/drivers/shared_all/include" -I "." -DLOG_LVL=25 -D_DEFAULT_SOURCE -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c conv.cpp -o conv.o g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I "./vic/vic_run/include" -I "./vic/drivers/shared_all/include" -I "." -DLOG_LVL=25 -D_DEFAULT_SOURCE -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c display_current_settings.cpp -o display_current_settings.o g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I "./vic/vic_run/include" -I "./vic/drivers/shared_all/include" -I "." -DLOG_LVL=25 -D_DEFAULT_SOURCE -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c force.cpp -o force.o g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I "./vic/vic_run/include" -I "./vic/drivers/shared_all/include" -I "." -DLOG_LVL=25 -D_DEFAULT_SOURCE -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c get_options.cpp -o get_options.o g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I "./vic/vic_run/include" -I "./vic/drivers/shared_all/include" -I "." -DLOG_LVL=25 -D_DEFAULT_SOURCE -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c globals.cpp -o globals.o g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I "./vic/vic_run/include" -I "./vic/drivers/shared_all/include" -I "." -DLOG_LVL=25 -D_DEFAULT_SOURCE -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c initiate.cpp -o initiate.o g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I "./vic/vic_run/include" -I "./vic/drivers/shared_all/include" -I "." -DLOG_LVL=25 -D_DEFAULT_SOURCE -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c make_output_info.cpp -o make_output_info.o make_output_info.cpp: In function ‘Rcpp::List make_output_tables(Rcpp::List)’: make_output_info.cpp:216:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 216 | for (int k = 0; k < out_metadata[varid].nelem; k++) { | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ make_output_info.cpp: In function ‘void write_data(stream_struct**, dmy_struct*, Rcpp::List&, Rcpp::IntegerVector&)’: make_output_info.cpp:257:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 257 | for (int v = 0; v < (*streams)[sn].nvars; v++) { | ~~^~~~~~~~~~~~~~~~~~~~~~ make_output_info.cpp:260:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 260 | for (int e = 0; e < out_metadata[varid].nelem; e++) { | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I "./vic/vic_run/include" -I "./vic/drivers/shared_all/include" -I "." -DLOG_LVL=25 -D_DEFAULT_SOURCE -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c make_params.cpp -o make_params.o make_params.cpp: In function ‘void make_soilparam(Rcpp::NumericVector, soil_con_struct*, veg_lib_struct*)’: make_params.cpp:10:8: warning: variable ‘run_cell’ set but not used [-Wunused-but-set-variable] 10 | bool run_cell; | ^~~~~~~~ g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I "./vic/vic_run/include" -I "./vic/drivers/shared_all/include" -I "." -DLOG_LVL=25 -D_DEFAULT_SOURCE -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c RcppExports.cpp -o RcppExports.o g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I "./vic/vic_run/include" -I "./vic/drivers/shared_all/include" -I "." -DLOG_LVL=25 -D_DEFAULT_SOURCE -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c vic_run_cell.cpp -o vic_run_cell.o g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I "./vic/vic_run/include" -I "./vic/drivers/shared_all/include" -I "." -DLOG_LVL=25 -D_DEFAULT_SOURCE -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c vic_version.cpp -o vic_version.o g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I "./vic/vic_run/include" -I "./vic/drivers/shared_all/include" -I "." -DLOG_LVL=25 -D_DEFAULT_SOURCE -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c vic_run_cells_all.cpp -o vic_run_cells_all.o g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I "./vic/vic_run/include" -I "./vic/drivers/shared_all/include" -I "." -DLOG_LVL=25 -D_DEFAULT_SOURCE -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c XAJ.cpp -o XAJ.o g++-13 -std=gnu++17 -shared -L/home/hornik/tmp/R.check/r-devel-gcc/Work/build/lib -Wl,-O1 -o VIC5.so vic/vic_run/src/advected_sensible_heat.o vic/vic_run/src/alloc_and_free.o vic/vic_run/src/arno_evap.o vic/vic_run/src/calc_atmos_energy_bal.o vic/vic_run/src/calc_gridcell_avg_albedo.o vic/vic_run/src/calc_Nscale_factors.o vic/vic_run/src/calc_rainonly.o vic/vic_run/src/calc_snow_coverage.o vic/vic_run/src/calc_surf_energy_bal.o vic/vic_run/src/calc_veg_params.o vic/vic_run/src/CalcAerodynamic.o vic/vic_run/src/CalcBlowingSnow.o vic/vic_run/src/canopy_assimilation.o vic/vic_run/src/canopy_evap.o vic/vic_run/src/comparisons.o vic/vic_run/src/compute_coszen.o vic/vic_run/src/compute_derived_lake_dimensions.o vic/vic_run/src/compute_pot_evap.o vic/vic_run/src/compute_soil_resp.o vic/vic_run/src/compute_zwt.o vic/vic_run/src/correct_precip.o vic/vic_run/src/estimate_T1.o vic/vic_run/src/faparl.o vic/vic_run/src/frozen_soil.o vic/vic_run/src/func_atmos_energy_bal.o vic/vic_run/src/func_atmos_moist_bal.o vic/vic_run/src/func_canopy_energy_bal.o vic/vic_run/src/func_surf_energy_bal.o vic/vic_run/src/ice_melt.o vic/vic_run/src/IceEnergyBalance.o vic/vic_run/src/initialize_lake.o vic/vic_run/src/interpoloation.o vic/vic_run/src/lake_utils.o vic/vic_run/src/lakes.eb.o vic/vic_run/src/latent_heat_from_snow.o vic/vic_run/src/massrelease.o vic/vic_run/src/newt_raph_func_fast.o vic/vic_run/src/penman.o vic/vic_run/src/photosynth.o vic/vic_run/src/physics.o vic/vic_run/src/prepare_full_energy.o vic/vic_run/src/root_brent.o vic/vic_run/src/runoff.o vic/vic_run/src/snow_intercept.o vic/vic_run/src/snow_melt.o vic/vic_run/src/snow_utility.o vic/vic_run/src/SnowPackEnergyBalance.o vic/vic_run/src/soil_carbon_balance.o vic/vic_run/src/soil_conduction.o vic/vic_run/src/soil_thermal_eqn.o vic/vic_run/src/solve_snow.o vic/vic_run/src/StabilityCorrection.o vic/vic_run/src/surface_fluxes.o vic/vic_run/src/svp.o vic/vic_run/src/vic_run.o vic/vic_run/src/water_energy_balance.o vic/vic_run/src/water_under_ice.o vic/vic_run/src/write_layer.o vic/vic_run/src/write_vegvar.o vic/drivers/shared_all/src/agg_data.o vic/drivers/shared_all/src/alarms.o vic/drivers/shared_all/src/calc_root_fraction.o vic/drivers/shared_all/src/cmd_proc.o vic/drivers/shared_all/src/compress_files.o vic/drivers/shared_all/src/compute_derived_state_vars.o vic/drivers/shared_all/src/compute_lake_params.o vic/drivers/shared_all/src/compute_treeline.o vic/drivers/shared_all/src/forcing_utils.o vic/drivers/shared_all/src/free_all_vars.o vic/drivers/shared_all/src/free_vegcon.o vic/drivers/shared_all/src/generate_default_lake_state.o vic/drivers/shared_all/src/generate_default_state.o vic/drivers/shared_all/src/get_parameters.o vic/drivers/shared_all/src/history_metadata.o vic/drivers/shared_all/src/initialize_energy.o vic/drivers/shared_all/src/initialize_global.o vic/drivers/shared_all/src/initialize_options.o vic/drivers/shared_all/src/initialize_parameters.o vic/drivers/shared_all/src/initialize_snow.o vic/drivers/shared_all/src/initialize_soil.o vic/drivers/shared_all/src/initialize_veg.o vic/drivers/shared_all/src/input_tools.o vic/drivers/shared_all/src/make_all_vars.o vic/drivers/shared_all/src/make_cell_data.o vic/drivers/shared_all/src/make_dmy.o vic/drivers/shared_all/src/make_energy_bal.o vic/drivers/shared_all/src/make_snow_data.o vic/drivers/shared_all/src/make_veg_var.o vic/drivers/shared_all/src/open_file.o vic/drivers/shared_all/src/print_library_shared.o vic/drivers/shared_all/src/put_data.o vic/drivers/shared_all/src/set_output_defaults.o vic/drivers/shared_all/src/soil_moisture_from_water_table.o vic/drivers/shared_all/src/timing.o vic/drivers/shared_all/src/update_step_vars.o vic/drivers/shared_all/src/vic_history.o vic/drivers/shared_all/src/vic_log.o vic/drivers/shared_all/src/vic_time.o vic/drivers/shared_all/src/zero_output_list.o ./conv.o ./display_current_settings.o ./force.o ./get_options.o ./globals.o ./initiate.o ./make_output_info.o ./make_params.o ./RcppExports.o ./vic_run_cell.o ./vic_version.o vic_run_cells_all.o XAJ.o -fopenmp -llapack -L/home/hornik/tmp/R.check/r-devel-gcc/Work/build/lib -lRblas -lgfortran -lm -lquadmath -L/home/hornik/tmp/R.check/r-devel-gcc/Work/build/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmp3bhV2C/R.INSTALL17ed44304f6ff8/VIC5/src' make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmp3bhV2C/R.INSTALL17ed44304f6ff8/VIC5/src' make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmp3bhV2C/R.INSTALL17ed44304f6ff8/VIC5/src' installing to /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/00LOCK-VIC5/00new/VIC5/libs ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * creating tarball packaged installation of ‘VIC5’ as ‘VIC5_0.2.6_R_x86_64-pc-linux-gnu.tar.gz’ * DONE (VIC5)