* installing to library ‘/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages’ * installing *source* package ‘SpatMCA’ ... ** package ‘SpatMCA’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘g++-13 (Debian 13.2.0-23) 13.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmpy0bpkc/R.INSTALL21fb97644ebb0a/SpatMCA/src' g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppParallel/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c RcppExports.cpp -o RcppExports.o g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppParallel/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c RcppSpatMCA.cpp -o RcppSpatMCA.o RcppSpatMCA.cpp: In function ‘arma::mat cubicmatrix(arma::vec)’: RcppSpatMCA.cpp:27:26: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare] 27 | for (unsigned j = 0; j < p - 2; ++j) | ~~^~~~~~~ RcppSpatMCA.cpp:34:26: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare] 34 | for (unsigned j = 0; j < p - 3; ++j) | ~~^~~~~~~ RcppSpatMCA.cpp: In member function ‘virtual void tpm::operator()(std::size_t, std::size_t)’: RcppSpatMCA.cpp:51:30: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare] 51 | for (unsigned j = 0; j < p; j++) | ~~^~~ RcppSpatMCA.cpp:76:30: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare] 76 | for (unsigned k = 0; k < d; ++k) | ~~^~~ RcppSpatMCA.cpp: In function ‘arma::mat tpm2(arma::mat, arma::mat, arma::mat)’: RcppSpatMCA.cpp:126:32: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare] 126 | for (unsigned newi = 0; newi < pnew; newi++) | ~~~~~^~~~~~ RcppSpatMCA.cpp:128:28: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare] 128 | for (unsigned i = 0; i < K; i++) | ~~^~~ RcppSpatMCA.cpp:131:30: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare] 131 | for (unsigned j = 0; j < p; j++) | ~~^~~ RcppSpatMCA.cpp: In function ‘void spatmca_tau1(arma::mat&, arma::mat&, arma::mat&, arma::mat, int, int, double, int, double)’: RcppSpatMCA.cpp:172:32: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘const int’ [-Wsign-compare] 172 | for (unsigned iter = 0; iter < maxit; iter++) | ~~~~~^~~~~~~ RcppSpatMCA.cpp: In function ‘void spatmca_tau2(arma::mat&, arma::mat&, arma::mat&, arma::mat&, arma::mat&, arma::mat, double, double, int, int, double, int, double)’: RcppSpatMCA.cpp:207:32: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘const int’ [-Wsign-compare] 207 | for (unsigned iter = 0; iter < maxit; iter++) | ~~~~~^~~~~~~ RcppSpatMCA.cpp: In function ‘Rcpp::List spatmcacv_rcpp(Rcpp::NumericMatrix, Rcpp::NumericMatrix, Rcpp::NumericMatrix, Rcpp::NumericMatrix, int, int, Rcpp::NumericVector, Rcpp::NumericVector, Rcpp::NumericVector, Rcpp::NumericVector, Rcpp::NumericVector, int, double, Rcpp::NumericVector, Rcpp::NumericVector)’: RcppSpatMCA.cpp:639:25: warning: comparison of integer expressions of different signedness: ‘arma::uword’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare] 639 | for (uword m = 0; m < M; m++) | ~~^~~ RcppSpatMCA.cpp:700:25: warning: comparison of integer expressions of different signedness: ‘arma::uword’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare] 700 | for (uword m = 0; m < M; m++) | ~~^~~ RcppSpatMCA.cpp: In function ‘Rcpp::List spatmcacvall_rcpp(Rcpp::NumericMatrix, Rcpp::NumericMatrix, Rcpp::NumericMatrix, Rcpp::NumericMatrix, int, int, Rcpp::NumericVector, Rcpp::NumericVector, Rcpp::NumericVector, Rcpp::NumericVector, Rcpp::NumericVector, int, double, Rcpp::NumericVector, Rcpp::NumericVector)’: RcppSpatMCA.cpp:928:23: warning: comparison of integer expressions of different signedness: ‘arma::uword’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare] 928 | for (uword m = 0; m < M; m++) | ~~^~~ In file included from /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include/armadillo:661, from /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:57, from /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include/RcppArmadillo.h:29, from RcppSpatMCA.cpp:5: In member function ‘arma::Mat& arma::Mat::operator=(eT) [with eT = double]’, inlined from ‘Rcpp::List spatmcacv_rcpp(Rcpp::NumericMatrix, Rcpp::NumericMatrix, Rcpp::NumericMatrix, Rcpp::NumericMatrix, int, int, Rcpp::NumericVector, Rcpp::NumericVector, Rcpp::NumericVector, Rcpp::NumericVector, Rcpp::NumericVector, int, double, Rcpp::NumericVector, Rcpp::NumericVector)’ at RcppSpatMCA.cpp:690:12: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include/armadillo_bits/Mat_meat.hpp:812:22: warning: ‘tempout’ may be used uninitialized [-Wmaybe-uninitialized] 812 | access::rw(mem[0]) = val; | ~~~~~~~~~~~~~~~~~~~^~~~~ RcppSpatMCA.cpp: In function ‘Rcpp::List spatmcacv_rcpp(Rcpp::NumericMatrix, Rcpp::NumericMatrix, Rcpp::NumericMatrix, Rcpp::NumericMatrix, int, int, Rcpp::NumericVector, Rcpp::NumericVector, Rcpp::NumericVector, Rcpp::NumericVector, Rcpp::NumericVector, int, double, Rcpp::NumericVector, Rcpp::NumericVector)’: RcppSpatMCA.cpp:583:46: note: ‘tempout’ was declared here 583 | double cvtau1u, cvtau1v, cvtau2u, cvtau2v, tempout; | ^~~~~~~ g++-13 -std=gnu++17 -shared -L/home/hornik/tmp/R.check/r-devel-gcc/Work/build/lib -Wl,-O1 -o SpatMCA.so RcppExports.o RcppSpatMCA.o -fopenmp -llapack -L/home/hornik/tmp/R.check/r-devel-gcc/Work/build/lib -lRblas -lgfortran -lm -lquadmath -L/home/hornik/tmp/R.check/r-devel-gcc/Work/build/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmpy0bpkc/R.INSTALL21fb97644ebb0a/SpatMCA/src' make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmpy0bpkc/R.INSTALL21fb97644ebb0a/SpatMCA/src' make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmpy0bpkc/R.INSTALL21fb97644ebb0a/SpatMCA/src' installing to /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/00LOCK-SpatMCA/00new/SpatMCA/libs ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * creating tarball packaged installation of ‘SpatMCA’ as ‘SpatMCA_1.0.4_R_x86_64-pc-linux-gnu.tar.gz’ * DONE (SpatMCA)