* installing to library ‘/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages’
* installing *source* package ‘SMME’ ...
** package ‘SMME’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C++ compiler: ‘g++-13 (Debian 13.2.0-23) 13.2.0’
using C++11
make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpjHdexK/R.INSTALL1796896310a85e/SMME/src'
g++-13 -std=gnu++11 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -I../inst/include -fopenmp -fpic  -g -O2 -Wall -pedantic -mtune=native   -c RcppExports.cpp -o RcppExports.o
g++-13 -std=gnu++11 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -I../inst/include -fopenmp -fpic  -g -O2 -Wall -pedantic -mtune=native   -c rcppfunc.cpp -o rcppfunc.o
In file included from rcppfunc.cpp:7:
auxfunc.h: In function ‘arma::mat gradloss(const arma::cube&, const arma::mat&, const arma::vec&, int, double, int)’:
auxfunc.h:107:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const unsigned int’} [-Wsign-compare]
  107 | for(int j = 0; j < PhitZ.n_slices; j++){
      |                ~~^~~~~~~~~~~~~~~~
auxfunc.h:115:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const unsigned int’} [-Wsign-compare]
  115 | for(int j = 0; j < PhitZ.n_slices; j++){
      |                ~~^~~~~~~~~~~~~~~~
rcppfunc.cpp: In function ‘Rcpp::List pga(Rcpp::List, Rcpp::List, std::string, arma::vec, double, arma::vec, int, int, double, arma::mat, double, int, int, int, int, double, double, int, int, int, double, int, int, int, int, std::string)’:
rcppfunc.cpp:92:20: warning: ‘Lwave’ may be used uninitialized [-Wmaybe-uninitialized]
   92 | PhitZ.slice(j) = wt(Z.slice(j), dim, Lwave, h, g, J, p1, p2, p3, PhitZ.slice(j));
      |                  ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
rcppfunc.cpp:55:5: note: ‘Lwave’ was declared here
   55 | int Lwave, n1, n2, n3, p1, p2, p3;
      |     ^~~~~
g++-13 -std=gnu++11 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -I../inst/include -fopenmp -fpic  -g -O2 -Wall -pedantic -mtune=native   -c wave_filter.cpp -o wave_filter.o
g++-13 -std=gnu++11 -shared -L/home/hornik/tmp/R.check/r-devel-gcc/Work/build/lib -Wl,-O1 -o SMME.so RcppExports.o rcppfunc.o wave_filter.o -fopenmp -llapack -L/home/hornik/tmp/R.check/r-devel-gcc/Work/build/lib -lRblas -lgfortran -lm -lquadmath -L/home/hornik/tmp/R.check/r-devel-gcc/Work/build/lib -lR
make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpjHdexK/R.INSTALL1796896310a85e/SMME/src'
make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpjHdexK/R.INSTALL1796896310a85e/SMME/src'
make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpjHdexK/R.INSTALL1796896310a85e/SMME/src'
installing to /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/00LOCK-SMME/00new/SMME/libs
** R
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* creating tarball
packaged installation of ‘SMME’ as ‘SMME_1.1.1_R_x86_64-pc-linux-gnu.tar.gz’
* DONE (SMME)