* installing to library ‘/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages’
* installing *source* package ‘SCEPtERbinary’ ...
** package ‘SCEPtERbinary’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C compiler: ‘gcc-13 (Debian 13.2.0-23) 13.2.0’
make[1]: Entering directory '/home/hornik/tmp/scratch/RtmplBIAza/R.INSTALL177b895a874d92/SCEPtERbinary/src'
gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c lik4.c -o lik4.o
lik4.c: In function ‘lik4bin’:
lik4.c:88:29: warning: unused variable ‘d4’ [-Wunused-variable]
   88 |   DATA5 *d, *d1, *d2, *d3, *d4;
      |                             ^~
lik4.c:88:24: warning: unused variable ‘d3’ [-Wunused-variable]
   88 |   DATA5 *d, *d1, *d2, *d3, *d4;
      |                        ^~
lik4.c:86:68: warning: unused variable ‘low’ [-Wunused-variable]
   86 |   long i, j, nres, nres1, nres2, DIM, start, n, startT, stopT, up, low;
      |                                                                    ^~~
lik4.c:86:64: warning: unused variable ‘up’ [-Wunused-variable]
   86 |   long i, j, nres, nres1, nres2, DIM, start, n, startT, stopT, up, low;
      |                                                                ^~
lik4.c:86:39: warning: unused variable ‘start’ [-Wunused-variable]
   86 |   long i, j, nres, nres1, nres2, DIM, start, n, startT, stopT, up, low;
      |                                       ^~~~~
lik4.c:85:17: warning: unused variable ‘sel’ [-Wunused-variable]
   85 |   SEXP res, dm, sel;
      |                 ^~~
lik4.c:85:13: warning: unused variable ‘dm’ [-Wunused-variable]
   85 |   SEXP res, dm, sel;
      |             ^~
lik4.c:84:33: warning: unused variable ‘time2’ [-Wunused-variable]
   84 |   double sTeffP, sTeffM, time1, time2;
      |                                 ^~~~~
lik4.c:84:26: warning: unused variable ‘time1’ [-Wunused-variable]
   84 |   double sTeffP, sTeffM, time1, time2;
      |                          ^~~~~
lik4.c:80:14: warning: variable ‘ncol’ set but not used [-Wunused-but-set-variable]
   80 |   long nrow, ncol, count;
      |              ^~~~
lik4.c:79:43: warning: variable ‘EXP’ set but not used [-Wunused-but-set-variable]
   79 |   double Vthr, maxL, maxL1, maxL2, lmult, EXP, rpcage;
      |                                           ^~~
lik4.c:79:36: warning: variable ‘lmult’ set but not used [-Wunused-but-set-variable]
   79 |   double Vthr, maxL, maxL1, maxL2, lmult, EXP, rpcage;
      |                                    ^~~~~
lik4.c:313:28: warning: ‘maxL1’ may be used uninitialized [-Wmaybe-uninitialized]
  313 |           if(d[j].L >= 0.95*maxL)
      |                        ~~~~^~~~~
lik4.c:79:22: note: ‘maxL1’ was declared here
   79 |   double Vthr, maxL, maxL1, maxL2, lmult, EXP, rpcage;
      |                      ^~~~~
lik4.c:86:20: warning: ‘nres1’ may be used uninitialized [-Wmaybe-uninitialized]
   86 |   long i, j, nres, nres1, nres2, DIM, start, n, startT, stopT, up, low;
      |                    ^~~~~
gcc-13 -shared -L/home/hornik/tmp/R.check/r-devel-gcc/Work/build/lib -Wl,-O1 -o SCEPtERbinary.so lik4.o -L/home/hornik/tmp/R.check/r-devel-gcc/Work/build/lib -lR
make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmplBIAza/R.INSTALL177b895a874d92/SCEPtERbinary/src'
make[1]: Entering directory '/home/hornik/tmp/scratch/RtmplBIAza/R.INSTALL177b895a874d92/SCEPtERbinary/src'
make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmplBIAza/R.INSTALL177b895a874d92/SCEPtERbinary/src'
installing to /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/00LOCK-SCEPtERbinary/00new/SCEPtERbinary/libs
** R
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* creating tarball
packaged installation of ‘SCEPtERbinary’ as ‘SCEPtERbinary_0.1-1_R_x86_64-pc-linux-gnu.tar.gz’
* DONE (SCEPtERbinary)