* installing to library ‘/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages’ * installing *source* package ‘Rdsdp’ ... ** package ‘Rdsdp’ successfully unpacked and MD5 sums checked ** using staged installation Using bundled DSDP checking for gcc... gcc-13 checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether the compiler supports GNU C... yes checking whether gcc-13 accepts -g... yes checking for gcc-13 option to enable C11 features... none needed checking how to run the C preprocessor... gcc-13 -E configure: creating ./config.status config.status: creating src/Makevars ** libs using C compiler: ‘gcc-13 (Debian 13.2.0-23) 13.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpGwNmve/R.INSTALLc4b0e271722c/Rdsdp/src' gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -Idsdp/include -I/usr/local/include -D_FORTIFY_SOURCE=3 -DNOSHORTS -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c Rdsdp.c -o Rdsdp.o gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -Idsdp/include -I/usr/local/include -D_FORTIFY_SOURCE=3 -DNOSHORTS -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c Rreadsdpa.c -o Rreadsdpa.o Rreadsdpa.c: In function ‘ReadSDPA2’: Rreadsdpa.c:489:9: warning: variable ‘fgets_return_pt’ set but not used [-Wunused-but-set-variable] 489 | char* fgets_return_pt; | ^~~~~~~~~~~~~~~ Rreadsdpa.c:488:7: warning: variable ‘fscanf_return_int’ set but not used [-Wunused-but-set-variable] 488 | int fscanf_return_int; | ^~~~~~~~~~~~~~~~~ Rreadsdpa.c: In function ‘DSDPReadOptions2’: Rreadsdpa.c:1021:9: warning: variable ‘fgets_return_pt’ set but not used [-Wunused-but-set-variable] 1021 | char* fgets_return_pt; | ^~~~~~~~~~~~~~~ (cd dsdp && \ (make dsdplibrary CC="gcc-13" CFLAGS="-g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -fpic -DNOSHORTS -I../../include " AR="ar" RANLIB="ranlib") && \ touch dsdp.ts) make[2]: Entering directory '/home/hornik/tmp/scratch/RtmpGwNmve/R.INSTALLc4b0e271722c/Rdsdp/src/dsdp' ========================================== Compiling DSDP5 For help with installation problems, please send EVERYTHING printed out below to the developers ========================================== On Fri May 3 10:51:25 CEST 2024 on gimli2 Machine characteristics: Linux gimli2 6.4.0-4-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.4.13-1 (2023-08-31) x86_64 GNU/Linux ----------------------------------------- Using C compiler: gcc-13 Using compiler options: -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -fpic -DNOSHORTS -I../../include ----------------------------------------- Current Directory: /home/hornik/tmp/scratch/RtmpGwNmve/R.INSTALLc4b0e271722c/Rdsdp/src/dsdp Using DSDP directory: ../../ ========================================== cd src; make all make[3]: Entering directory '/home/hornik/tmp/scratch/RtmpGwNmve/R.INSTALLc4b0e271722c/Rdsdp/src/dsdp/src' cd solver; make dsdplib; make[4]: Entering directory '/home/hornik/tmp/scratch/RtmpGwNmve/R.INSTALLc4b0e271722c/Rdsdp/src/dsdp/src/solver' gcc-13 -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -fpic -DNOSHORTS -I../../include -c dualalg.c gcc-13 -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -fpic -DNOSHORTS -I../../include -c dualimpl.c gcc-13 -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -fpic -DNOSHORTS -I../../include -c dsdpcops.c gcc-13 -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -fpic -DNOSHORTS -I../../include -c dsdpschurmat.c dsdpschurmat.c: In function ‘DSDPSetFixedVariables’: dsdpschurmat.c:696:10: warning: variable ‘info’ set but not used [-Wunused-but-set-variable] 696 | int i,info; | ^~~~ gcc-13 -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -fpic -DNOSHORTS -I../../include -c dsdpcg.c gcc-13 -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -fpic -DNOSHORTS -I../../include -c dsdpconverge.c gcc-13 -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -fpic -DNOSHORTS -I../../include -c dsdpsetup.c gcc-13 -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -fpic -DNOSHORTS -I../../include -c dsdpcone.c gcc-13 -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -fpic -DNOSHORTS -I../../include -c dsdpsetoptions.c dsdpsetoptions.c: In function ‘DSDPReadOptions’: dsdpsetoptions.c:152:9: warning: variable ‘fgets_return_pt’ set but not used [-Wunused-but-set-variable] 152 | char* fgets_return_pt; | ^~~~~~~~~~~~~~~ dsdpsetoptions.c:147:9: warning: variable ‘info’ set but not used [-Wunused-but-set-variable] 147 | int i,info,line=0; | ^~~~ gcc-13 -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -fpic -DNOSHORTS -I../../include -c dsdpsetdata.c gcc-13 -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -fpic -DNOSHORTS -I../../include -c dsdprescone.c gcc-13 -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -fpic -DNOSHORTS -I../../include -c dsdpobjcone.c gcc-13 -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -fpic -DNOSHORTS -I../../include -c dsdpprintout.c gcc-13 -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -fpic -DNOSHORTS -I../../include -c dsdpschurmatadd.c gcc-13 -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -fpic -DNOSHORTS -I../../include -c dsdpx.c dsdpx.c: In function ‘DSDPComputeX’: dsdpx.c:57:76: warning: variable ‘rpobjerr’ set but not used [-Wunused-but-set-variable] 57 | double pobj=0,ppobj2=0,ddobj,tracexs=0,tracexs2=0,rpinfeas=0,rpinfeas2=0,rpobjerr=0; | ^~~~~~~~ ar cr ../..//lib/libdsdp.a dualalg.o dualimpl.o dsdpcops.o dsdpschurmat.o dsdpcg.o dsdpconverge.o dsdpsetup.o dsdpcone.o dsdpsetoptions.o dsdpsetdata.o dsdprescone.o dsdpobjcone.o dsdpprintout.o dsdpschurmatadd.o dsdpx.o ranlib ../..//lib/libdsdp.a make clean make[5]: Entering directory '/home/hornik/tmp/scratch/RtmpGwNmve/R.INSTALLc4b0e271722c/Rdsdp/src/dsdp/src/solver' rm -f dualalg.o dualimpl.o dsdpcops.o dsdpschurmat.o dsdpcg.o dsdpconverge.o dsdpsetup.o dsdpcone.o dsdpsetoptions.o dsdpsetdata.o dsdprescone.o dsdpobjcone.o dsdpprintout.o dsdpschurmatadd.o dsdpx.o make[5]: Leaving directory '/home/hornik/tmp/scratch/RtmpGwNmve/R.INSTALLc4b0e271722c/Rdsdp/src/dsdp/src/solver' make[4]: Leaving directory '/home/hornik/tmp/scratch/RtmpGwNmve/R.INSTALLc4b0e271722c/Rdsdp/src/dsdp/src/solver' cd sdp; make dsdplib; make[4]: Entering directory '/home/hornik/tmp/scratch/RtmpGwNmve/R.INSTALLc4b0e271722c/Rdsdp/src/dsdp/src/sdp' gcc-13 -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -fpic -DNOSHORTS -I../../include -I../solver -c dsdpstep.c dsdpstep.c: In function ‘ComputeStepROBUST’: dsdpstep.c:283:10: warning: variable ‘LDA’ set but not used [-Wunused-but-set-variable] 283 | int N, LDA, LWORK; | ^~~ gcc-13 -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -fpic -DNOSHORTS -I../../include -I../solver -c printsdpa.c gcc-13 -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -fpic -DNOSHORTS -I../../include -I../solver -c sdpconevec.c gcc-13 -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -fpic -DNOSHORTS -I../../include -I../solver -c sdpsss.c sdpsss.c: In function ‘CountNonzeros’: sdpsss.c:59:5: warning: this ‘for’ clause does not guard... [-Wmisleading-indentation] 59 | for (j=0;jn; | ^~~ dlpack.c: In function ‘DenseSymPSDNormF2’: dlpack.c:423:7: warning: variable ‘info’ set but not used [-Wunused-but-set-variable] 423 | int info; | ^~~~ dlpack.c: In function ‘DSDPXMatPCreateWithData’: dlpack.c:587:10: warning: variable ‘dtmp’ set but not used [-Wunused-but-set-variable] 587 | double dtmp; | ^~~~ dlpack.c: In function ‘DvechmatGetRowAdd’: dlpack.c:717:7: warning: variable ‘info’ set but not used [-Wunused-but-set-variable] 717 | int info; | ^~~~ dlpack.c: In function ‘DSDPGetDMat’: dlpack.c:939:10: warning: variable ‘dtmp’ set but not used [-Wunused-but-set-variable] 939 | double dtmp; | ^~~~ gcc-13 -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -fpic -DNOSHORTS -I../../include -I../solver -I../sdp -c dufull.c dufull.c: In function ‘DSDPGetEigs2’: dufull.c:163:23: warning: variable ‘LDZ’ set but not used [-Wunused-but-set-variable] 163 | ffinteger N=n,LDA=n,LDZ=n,LWORK=nd,INFO=0; | ^~~ dufull.c: In function ‘DTRUMatSolve’: dufull.c:255:13: warning: variable ‘ierr’ set but not used [-Wunused-but-set-variable] 255 | ffinteger ierr,INFO=0,NRHS=1,LDA=A->LDA,LDB=A->LDA,N=A->n; | ^~~~ dufull.c: In function ‘DSDPLAPACKSUDualMatCreate2P’: dufull.c:822:7: warning: variable ‘info’ set but not used [-Wunused-but-set-variable] 822 | int info; | ^~~~ dufull.c: In function ‘DenseSymPSDNormF2’: dufull.c:855:7: warning: variable ‘info’ set but not used [-Wunused-but-set-variable] 855 | int info; | ^~~~ dufull.c: In function ‘DSDPXMatUCreateWithData’: dufull.c:958:10: warning: variable ‘dtmp’ set but not used [-Wunused-but-set-variable] 958 | double dtmp; | ^~~~ dufull.c: In function ‘DvecumatGetRowAdd’: dufull.c:1075:7: warning: variable ‘info’ set but not used [-Wunused-but-set-variable] 1075 | int info; | ^~~~ dufull.c: In function ‘DSDPGetDUMat’: dufull.c:1302:10: warning: variable ‘dtmp’ set but not used [-Wunused-but-set-variable] 1302 | double dtmp; | ^~~~ dufull.c: At top level: dufull.c:340:12: warning: ‘DTRUMatView2’ defined but not used [-Wunused-function] 340 | static int DTRUMatView2(void* AA){ | ^~~~~~~~~~~~ gcc-13 -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -fpic -DNOSHORTS -I../../include -I../solver -I../sdp -c sdpvec.c sdpvec.c: In function ‘DSDPVecSetBasis’: sdpvec.c:138:7: warning: variable ‘info’ set but not used [-Wunused-but-set-variable] 138 | int info; | ^~~~ sdpvec.c: In function ‘DSDPVecWAXPY’: sdpvec.c:341:7: warning: variable ‘info’ set but not used [-Wunused-but-set-variable] 341 | int info; | ^~~~ gcc-13 -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -fpic -DNOSHORTS -I../../include -I../solver -I../sdp -c identity.c gcc-13 -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -fpic -DNOSHORTS -I../../include -I../solver -I../sdp -c spds.c gcc-13 -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -fpic -DNOSHORTS -I../../include -I../solver -I../sdp -c zeromat.c gcc-13 -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -fpic -DNOSHORTS -I../../include -I../solver -I../sdp -c onemat.c gcc-13 -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -fpic -DNOSHORTS -I../../include -I../solver -I../sdp -c diag.c gcc-13 -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -fpic -DNOSHORTS -I../../include -I../solver -I../sdp -c rmmat.c gcc-13 -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -fpic -DNOSHORTS -I../../include -I../solver -I../sdp -c cholmat.c gcc-13 -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -fpic -DNOSHORTS -I../../include -I../solver -I../sdp -c cholmat2.c gcc-13 -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -fpic -DNOSHORTS -I../../include -I../solver -I../sdp -c dtrsm2.c gcc-13 -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -fpic -DNOSHORTS -I../../include -I../solver -I../sdp -c sdpmatx.c gcc-13 -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -fpic -DNOSHORTS -I../../include -I../solver -I../sdp -c sdpnfac.c gcc-13 -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -fpic -DNOSHORTS -I../../include -I../solver -I../sdp -c sdporder.c gcc-13 -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -fpic -DNOSHORTS -I../../include -I../solver -I../sdp -c sdpalloc.c gcc-13 -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -fpic -DNOSHORTS -I../../include -I../solver -I../sdp -c sdpsymb.c gcc-13 -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -fpic -DNOSHORTS -I../../include -I../solver -I../sdp -c sdpxlist.c gcc-13 -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -fpic -DNOSHORTS -I../../include -I../solver -I../sdp -c sdpdvct.c gcc-13 -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -fpic -DNOSHORTS -I../../include -I../solver -I../sdp -c sdpexit.c ar cr ../..//lib/libdsdp.a vech.o vechu.o drowcol.o dlpack.o dufull.o sdpvec.o identity.o spds.o zeromat.o onemat.o diag.o rmmat.o cholmat.o cholmat2.o dtrsm2.o sdpmatx.o sdpnfac.o sdporder.o sdpalloc.o sdpsymb.o sdpxlist.o sdpdvct.o sdpexit.o ranlib ../..//lib/libdsdp.a make clean make[5]: Entering directory '/home/hornik/tmp/scratch/RtmpGwNmve/R.INSTALLc4b0e271722c/Rdsdp/src/dsdp/src/vecmat' rm -f vech.o vechu.o drowcol.o dlpack.o dufull.o sdpvec.o identity.o spds.o zeromat.o onemat.o diag.o rmmat.o cholmat.o cholmat2.o dtrsm2.o sdpmatx.o sdpnfac.o sdporder.o sdpalloc.o sdpsymb.o sdpxlist.o sdpdvct.o sdpexit.o make[5]: Leaving directory '/home/hornik/tmp/scratch/RtmpGwNmve/R.INSTALLc4b0e271722c/Rdsdp/src/dsdp/src/vecmat' make[4]: Leaving directory '/home/hornik/tmp/scratch/RtmpGwNmve/R.INSTALLc4b0e271722c/Rdsdp/src/dsdp/src/vecmat' cd sys; make dsdplib; make[4]: Entering directory '/home/hornik/tmp/scratch/RtmpGwNmve/R.INSTALLc4b0e271722c/Rdsdp/src/dsdp/src/sys' gcc-13 -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -fpic -DNOSHORTS -I../../include -DDSDP_TIME -c dsdperror.c gcc-13 -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -fpic -DNOSHORTS -I../../include -DDSDP_TIME -c dsdploginfo.c dsdploginfo.c: In function ‘DSDPLogInfoAllow’: dsdploginfo.c:70:10: warning: variable ‘ierr’ set but not used [-Wunused-but-set-variable] 70 | char* ierr; | ^~~~ dsdploginfo.c: In function ‘DSDPLogFInfo’: dsdploginfo.c:114:15: warning: variable ‘urank’ set but not used [-Wunused-but-set-variable] 114 | int urank; | ^~~~~ gcc-13 -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -fpic -DNOSHORTS -I../../include -DDSDP_TIME -c dsdplog.c gcc-13 -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -fpic -DNOSHORTS -I../../include -DDSDP_TIME -c dsdptime.c ar cr ../..//lib/libdsdp.a dsdperror.o dsdploginfo.o dsdplog.o dsdptime.o ranlib ../..//lib/libdsdp.a make clean make[5]: Entering directory '/home/hornik/tmp/scratch/RtmpGwNmve/R.INSTALLc4b0e271722c/Rdsdp/src/dsdp/src/sys' rm -f dsdperror.o dsdploginfo.o dsdplog.o dsdptime.o make[5]: Leaving directory '/home/hornik/tmp/scratch/RtmpGwNmve/R.INSTALLc4b0e271722c/Rdsdp/src/dsdp/src/sys' make[4]: Leaving directory '/home/hornik/tmp/scratch/RtmpGwNmve/R.INSTALLc4b0e271722c/Rdsdp/src/dsdp/src/sys' cd bounds; make dsdplib; make[4]: Entering directory '/home/hornik/tmp/scratch/RtmpGwNmve/R.INSTALLc4b0e271722c/Rdsdp/src/dsdp/src/bounds' gcc-13 -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -fpic -DNOSHORTS -I../../include -I../solver -c dbounds.c dbounds.c: In function ‘BConeComputeS’: dbounds.c:90:12: warning: variable ‘info’ set but not used [-Wunused-but-set-variable] 90 | int i,ii,info; | ^~~~ dbounds.c: In function ‘LPANorm2’: dbounds.c:366:12: warning: variable ‘info’ set but not used [-Wunused-but-set-variable] 366 | int i,ii,info; | ^~~~ gcc-13 -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -fpic -DNOSHORTS -I../../include -I../solver -c allbounds.c allbounds.c: In function ‘LUBoundsHessian’: allbounds.c:100:18: warning: variable ‘asrs’ set but not used [-Wunused-but-set-variable] 100 | double assa,as,asrs=0,sl,su; | ^~~~ ar cr ../..//lib/libdsdp.a dbounds.o allbounds.o ranlib ../..//lib/libdsdp.a make clean make[5]: Entering directory '/home/hornik/tmp/scratch/RtmpGwNmve/R.INSTALLc4b0e271722c/Rdsdp/src/dsdp/src/bounds' rm -f dbounds.o allbounds.o make[5]: Leaving directory '/home/hornik/tmp/scratch/RtmpGwNmve/R.INSTALLc4b0e271722c/Rdsdp/src/dsdp/src/bounds' make[4]: Leaving directory '/home/hornik/tmp/scratch/RtmpGwNmve/R.INSTALLc4b0e271722c/Rdsdp/src/dsdp/src/bounds' make[3]: Leaving directory '/home/hornik/tmp/scratch/RtmpGwNmve/R.INSTALLc4b0e271722c/Rdsdp/src/dsdp/src' make[2]: Leaving directory '/home/hornik/tmp/scratch/RtmpGwNmve/R.INSTALLc4b0e271722c/Rdsdp/src/dsdp' gcc-13 -shared -L/home/hornik/tmp/R.check/r-devel-gcc/Work/build/lib -Wl,-O1 -o Rdsdp.so Rdsdp.o Rreadsdpa.o -Ldsdp/lib -ldsdp -llapack -L/home/hornik/tmp/R.check/r-devel-gcc/Work/build/lib -lRblas -lgfortran -lm -lquadmath -lm -L/home/hornik/tmp/R.check/r-devel-gcc/Work/build/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpGwNmve/R.INSTALLc4b0e271722c/Rdsdp/src' make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpGwNmve/R.INSTALLc4b0e271722c/Rdsdp/src' make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpGwNmve/R.INSTALLc4b0e271722c/Rdsdp/src' installing to /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/00LOCK-Rdsdp/00new/Rdsdp/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * creating tarball packaged installation of ‘Rdsdp’ as ‘Rdsdp_1.0.5.2.1_R_x86_64-pc-linux-gnu.tar.gz’ * DONE (Rdsdp)