* installing to library ‘/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages’
* installing *source* package ‘RMSS’ ...
** package ‘RMSS’ successfully unpacked and MD5 sums checked
** using staged installation
checking whether the C++ compiler works... yes
checking for C++ compiler default output file name... a.out
checking for suffix of executables... 
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether we are using the GNU C++ compiler... yes
checking whether g++-13 -std=gnu++17 accepts -g... yes
checking whether C++ compiler accepts -fstrict-aliasing... yes
checking for g++-13 -std=gnu++17 option to support OpenMP... -fopenmp
checking C++ support for OpenMP... yes
checking OpenMP support for tasks... yes, with shared constant local variables
checking OpenMP support for custom reductions... yes
configure: Metrics disabled
configure: creating ./config.status
config.status: creating src/Makevars
config.status: creating R/autoconfig.R
config.status: creating src/autoconfig.h
** libs
using C++ compiler: ‘g++-13 (Debian 13.2.0-23) 13.2.0’
using C++17
make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmp5AFchx/R.INSTALL25befd42904a6b/RMSS/src'
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -D__STDC_LIMIT_MACROS -DHAVE_RCPP -DTESTTHAT_DISABLED -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -fstrict-aliasing -fopenmp -fpic  -g -O2 -Wall -pedantic -mtune=native   -c Array2Cube.cpp -o Array2Cube.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -D__STDC_LIMIT_MACROS -DHAVE_RCPP -DTESTTHAT_DISABLED -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -fstrict-aliasing -fopenmp -fpic  -g -O2 -Wall -pedantic -mtune=native   -c EnsembleModel.cpp -o EnsembleModel.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -D__STDC_LIMIT_MACROS -DHAVE_RCPP -DTESTTHAT_DISABLED -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -fstrict-aliasing -fopenmp -fpic  -g -O2 -Wall -pedantic -mtune=native   -c Generate3D.cpp -o Generate3D.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -D__STDC_LIMIT_MACROS -DHAVE_RCPP -DTESTTHAT_DISABLED -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -fstrict-aliasing -fopenmp -fpic  -g -O2 -Wall -pedantic -mtune=native   -c InitializeEnsembleModel.cpp -o InitializeEnsembleModel.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -D__STDC_LIMIT_MACROS -DHAVE_RCPP -DTESTTHAT_DISABLED -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -fstrict-aliasing -fopenmp -fpic  -g -O2 -Wall -pedantic -mtune=native   -c NeighborhoodSearch.cpp -o NeighborhoodSearch.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -D__STDC_LIMIT_MACROS -DHAVE_RCPP -DTESTTHAT_DISABLED -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -fstrict-aliasing -fopenmp -fpic  -g -O2 -Wall -pedantic -mtune=native   -c RInterface.cpp -o RInterface.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -D__STDC_LIMIT_MACROS -DHAVE_RCPP -DTESTTHAT_DISABLED -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -fstrict-aliasing -fopenmp -fpic  -g -O2 -Wall -pedantic -mtune=native   -c RInterfaceCV.cpp -o RInterfaceCV.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -D__STDC_LIMIT_MACROS -DHAVE_RCPP -DTESTTHAT_DISABLED -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -fstrict-aliasing -fopenmp -fpic  -g -O2 -Wall -pedantic -mtune=native   -c RcppExports.cpp -o RcppExports.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -D__STDC_LIMIT_MACROS -DHAVE_RCPP -DTESTTHAT_DISABLED -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -fstrict-aliasing -fopenmp -fpic  -g -O2 -Wall -pedantic -mtune=native   -c Scaling.cpp -o Scaling.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -D__STDC_LIMIT_MACROS -DHAVE_RCPP -DTESTTHAT_DISABLED -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -fstrict-aliasing -fopenmp -fpic  -g -O2 -Wall -pedantic -mtune=native   -c SetDifference.cpp -o SetDifference.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -D__STDC_LIMIT_MACROS -DHAVE_RCPP -DTESTTHAT_DISABLED -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -fstrict-aliasing -fopenmp -fpic  -g -O2 -Wall -pedantic -mtune=native   -c TrimPredictionResiduals.cpp -o TrimPredictionResiduals.o
g++-13 -std=gnu++17 -shared -L/home/hornik/tmp/R.check/r-devel-gcc/Work/build/lib -Wl,-O1 -o RMSS.so Array2Cube.o EnsembleModel.o Generate3D.o InitializeEnsembleModel.o NeighborhoodSearch.o RInterface.o RInterfaceCV.o RcppExports.o Scaling.o SetDifference.o TrimPredictionResiduals.o -llapack -L/home/hornik/tmp/R.check/r-devel-gcc/Work/build/lib -lRblas -lgfortran -lm -lquadmath -fopenmp -L/home/hornik/tmp/R.check/r-devel-gcc/Work/build/lib -lR
make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmp5AFchx/R.INSTALL25befd42904a6b/RMSS/src'
make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmp5AFchx/R.INSTALL25befd42904a6b/RMSS/src'
make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmp5AFchx/R.INSTALL25befd42904a6b/RMSS/src'
installing to /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/00LOCK-RMSS/00new/RMSS/libs
** R
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* creating tarball
packaged installation of ‘RMSS’ as ‘RMSS_1.1.1_R_x86_64-pc-linux-gnu.tar.gz’
* DONE (RMSS)