* installing to library ‘/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages’ * installing *source* package ‘RMSS’ ... ** package ‘RMSS’ successfully unpacked and MD5 sums checked ** using staged installation checking whether the C++ compiler works... yes checking for C++ compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C++ compiler... yes checking whether g++-13 -std=gnu++17 accepts -g... yes checking whether C++ compiler accepts -fstrict-aliasing... yes checking for g++-13 -std=gnu++17 option to support OpenMP... -fopenmp checking C++ support for OpenMP... yes checking OpenMP support for tasks... yes, with shared constant local variables checking OpenMP support for custom reductions... yes configure: Metrics disabled configure: creating ./config.status config.status: creating src/Makevars config.status: creating R/autoconfig.R config.status: creating src/autoconfig.h ** libs using C++ compiler: ‘g++-13 (Debian 13.2.0-23) 13.2.0’ using C++17 make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmp5AFchx/R.INSTALL25befd42904a6b/RMSS/src' g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -D__STDC_LIMIT_MACROS -DHAVE_RCPP -DTESTTHAT_DISABLED -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fstrict-aliasing -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c Array2Cube.cpp -o Array2Cube.o g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -D__STDC_LIMIT_MACROS -DHAVE_RCPP -DTESTTHAT_DISABLED -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fstrict-aliasing -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c EnsembleModel.cpp -o EnsembleModel.o g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -D__STDC_LIMIT_MACROS -DHAVE_RCPP -DTESTTHAT_DISABLED -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fstrict-aliasing -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c Generate3D.cpp -o Generate3D.o g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -D__STDC_LIMIT_MACROS -DHAVE_RCPP -DTESTTHAT_DISABLED -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fstrict-aliasing -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c InitializeEnsembleModel.cpp -o InitializeEnsembleModel.o g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -D__STDC_LIMIT_MACROS -DHAVE_RCPP -DTESTTHAT_DISABLED -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fstrict-aliasing -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c NeighborhoodSearch.cpp -o NeighborhoodSearch.o g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -D__STDC_LIMIT_MACROS -DHAVE_RCPP -DTESTTHAT_DISABLED -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fstrict-aliasing -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c RInterface.cpp -o RInterface.o g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -D__STDC_LIMIT_MACROS -DHAVE_RCPP -DTESTTHAT_DISABLED -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fstrict-aliasing -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c RInterfaceCV.cpp -o RInterfaceCV.o g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -D__STDC_LIMIT_MACROS -DHAVE_RCPP -DTESTTHAT_DISABLED -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fstrict-aliasing -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c RcppExports.cpp -o RcppExports.o g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -D__STDC_LIMIT_MACROS -DHAVE_RCPP -DTESTTHAT_DISABLED -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fstrict-aliasing -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c Scaling.cpp -o Scaling.o g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -D__STDC_LIMIT_MACROS -DHAVE_RCPP -DTESTTHAT_DISABLED -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fstrict-aliasing -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c SetDifference.cpp -o SetDifference.o g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -D__STDC_LIMIT_MACROS -DHAVE_RCPP -DTESTTHAT_DISABLED -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fstrict-aliasing -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c TrimPredictionResiduals.cpp -o TrimPredictionResiduals.o g++-13 -std=gnu++17 -shared -L/home/hornik/tmp/R.check/r-devel-gcc/Work/build/lib -Wl,-O1 -o RMSS.so Array2Cube.o EnsembleModel.o Generate3D.o InitializeEnsembleModel.o NeighborhoodSearch.o RInterface.o RInterfaceCV.o RcppExports.o Scaling.o SetDifference.o TrimPredictionResiduals.o -llapack -L/home/hornik/tmp/R.check/r-devel-gcc/Work/build/lib -lRblas -lgfortran -lm -lquadmath -fopenmp -L/home/hornik/tmp/R.check/r-devel-gcc/Work/build/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmp5AFchx/R.INSTALL25befd42904a6b/RMSS/src' make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmp5AFchx/R.INSTALL25befd42904a6b/RMSS/src' make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmp5AFchx/R.INSTALL25befd42904a6b/RMSS/src' installing to /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/00LOCK-RMSS/00new/RMSS/libs ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * creating tarball packaged installation of ‘RMSS’ as ‘RMSS_1.1.1_R_x86_64-pc-linux-gnu.tar.gz’ * DONE (RMSS)