• using R Under development (unstable) (2026-08-02 r90338)
• using platform: x86_64-pc-linux-gnu
• R was compiled by     gcc-16 (Debian 16.1.0-3) 16.1.0     GNU Fortran (Debian 16.1.0-3) 16.1.0
• running under: Debian GNU/Linux forky/sid
• using session charset: UTF-8 * current time: 2026-08-03 12:22:02 UTC
• checking for file ‘MPTinR/DESCRIPTION’ ... OK
• checking extension type ... Package
• this is package ‘MPTinR’ version ‘1.14.1’
• checking CRAN incoming feasibility ... [1s/2s] NOTE Maintainer: ‘Henrik Singmann <singmann@gmail.com>’ Package CITATION file contains call(s) to old-style personList() or as.personList(). Please use c() on person objects instead. Package CITATION file contains call(s) to old-style citEntry(). Please use bibentry() instead.
• checking package namespace information ... OK
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking if there is a namespace ... OK
• checking for executable files ... OK
• checking for hidden files and directories ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking serialization versions ... OK
• checking whether package ‘MPTinR’ can be installed ... OK See the install log for details.
• used C++ compiler: ‘g++-16 (Debian 16.1.0-3) 16.1.0’
• checking package directory ... OK
• checking for future file timestamps ... OK
• checking ‘build’ directory ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking for left-over files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking code files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... [2s/2s] OK
• checking whether the package can be loaded with stated dependencies ... [2s/2s] OK
• checking whether the package can be unloaded cleanly ... [2s/2s] OK
• checking whether the namespace can be loaded with stated dependencies ... [2s/2s] OK
• checking whether the namespace can be unloaded cleanly ... [2s/2s] OK
• checking loading without being on the library search path ... [2s/2s] OK
• checking use of S3 registration ... OK
• checking dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... [16s/22s] OK
• checking Rd files ... [0s/1s] NOTE checkRd: (-1) get.mpt.fia.Rd:60: Lost braces     60 | \item{lnconst}{When inequality constraints are present, \code{lnconst} serves as an adjustment of code{lnInt}. It estimates the logarithm of the proportion of parameter space [0,1]^S that satisfies those inequality constraints, and the log integral term is given by \code{lnInt+lnconst}.        | ^ checkRd: (-1) prediction.plot.Rd:38: Lost braces     38 | The labels on the x-axis. Default is \code{Tree 1} to code{Tree n}.        | ^
• checking Rd metadata ... OK
• checking Rd line widths ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking contents of ‘data’ directory ... OK
• checking data for non-ASCII characters ... [0s/0s] OK
• checking data for ASCII and uncompressed saves ... OK
• checking line endings in C/C++/Fortran sources/headers ... OK
• checking pragmas in C/C++ headers and code ... OK
• checking compilation flags used ... OK
• checking compiled code ... OK
• checking sizes of PDF files under ‘inst/doc’ ... OK
• checking installed files from ‘inst/doc’ ... OK
• checking files in ‘vignettes’ ... OK
• checking examples ... [4s/5s] OK
• checking for unstated dependencies in vignettes ... OK
• checking package vignettes ... OK
• checking re-building of vignette outputs ... [61s/77s] OK
• checking PDF version of manual ... [5s/7s] OK
• checking HTML version of manual ... [2s/2s] OK
• checking for non-standard things in the check directory ... OK
• checking for new files in some other directories ... NOTE Found the following files/directories:   ‘~/tmp/scratch/Rtmp0phavl’ ‘~/tmp/scratch/Rtmp20K5Nn’   ‘~/tmp/scratch/Rtmp2erkz7’ ‘~/tmp/scratch/Rtmp3SLNTh’   ‘~/tmp/scratch/Rtmp3hQyFL’ ‘~/tmp/scratch/Rtmp3w1WVV’   ‘~/tmp/scratch/Rtmp4cXjhE’ ‘~/tmp/scratch/Rtmp4g9LGd’   ‘~/tmp/scratch/Rtmp5kR1W5’ ‘~/tmp/scratch/Rtmp60ZVlt’   ‘~/tmp/scratch/Rtmp65g4qD’ ‘~/tmp/scratch/Rtmp7XkVBy’   ‘~/tmp/scratch/Rtmp7jvOtd’ ‘~/tmp/scratch/Rtmp87pxqc’   ‘~/tmp/scratch/Rtmp8J7TVj’ ‘~/tmp/scratch/Rtmp8sZcz9’   ‘~/tmp/scratch/Rtmp9jT7Fm’ ‘~/tmp/scratch/Rtmp9m6dYb’   ‘~/tmp/scratch/RtmpA3pWz3’ ‘~/tmp/scratch/RtmpA6tS1N’   ‘~/tmp/scratch/RtmpAUFYy3’ ‘~/tmp/scratch/RtmpAbNKkM’   ‘~/tmp/scratch/RtmpAplD2Y’ ‘~/tmp/scratch/RtmpBEVbEQ’   ‘~/tmp/scratch/RtmpBPtexU’ ‘~/tmp/scratch/RtmpBa0iFr’   ‘~/tmp/scratch/RtmpBzKjAr’ ‘~/tmp/scratch/RtmpC8Pmiv’   ‘~/tmp/scratch/RtmpCLTjgi’ ‘~/tmp/scratch/RtmpCe5iA6’   ‘~/tmp/scratch/RtmpDQq6Fr’ ‘~/tmp/scratch/RtmpDiS4d5’   ‘~/tmp/scratch/RtmpEBsNWt’ ‘~/tmp/scratch/RtmpG6ySTV’   ‘~/tmp/scratch/RtmpGgi3wQ’ ‘~/tmp/scratch/RtmpH4xW99’   ‘~/tmp/scratch/RtmpHDMJqw’ ‘~/tmp/scratch/RtmpIrGR1X’   ‘~/tmp/scratch/RtmpJ2Fyxm’ ‘~/tmp/scratch/RtmpJLJGPe’   ‘~/tmp/scratch/RtmpJO9IPk’ ‘~/tmp/scratch/RtmpK2k0Cl’   ‘~/tmp/scratch/RtmpKTKRgF’ ‘~/tmp/scratch/RtmpKmFadd’   ‘~/tmp/scratch/RtmpLSgzHr’ ‘~/tmp/scratch/RtmpLtRGha’   ‘~/tmp/scratch/RtmpM3f8bO’ ‘~/tmp/scratch/RtmpMyM693’   ‘~/tmp/scratch/RtmpN8Vhrl’ ‘~/tmp/scratch/RtmpNu1DY9’   ‘~/tmp/scratch/RtmpO3WMSy’ ‘~/tmp/scratch/RtmpOOHg7k’   ‘~/tmp/scratch/RtmpOXLcGe’ ‘~/tmp/scratch/RtmpOweQFw’   ‘~/tmp/scratch/RtmpPEjVqs’ ‘~/tmp/scratch/RtmpPT87Fq’   ‘~/tmp/scratch/RtmpQL4M4M’ ‘~/tmp/scratch/RtmpQLAkpF’   ‘~/tmp/scratch/RtmpQLGznv’ ‘~/tmp/scratch/RtmpQM0F2U’   ‘~/tmp/scratch/RtmpQbhrEN’ ‘~/tmp/scratch/RtmpQxdQcG’   ‘~/tmp/scratch/RtmpRTlOND’ ‘~/tmp/scratch/RtmpRUSnEF’   ‘~/tmp/scratch/RtmpRzIa5T’ ‘~/tmp/scratch/RtmpSJFfS1’   ‘~/tmp/scratch/RtmpSyAS7X’ ‘~/tmp/scratch/RtmpT65rdu’   ‘~/tmp/scratch/RtmpTDrbtX’ ‘~/tmp/scratch/RtmpTZsBEN’   ‘~/tmp/scratch/RtmpVOBKkA’ ‘~/tmp/scratch/RtmpVWFr97’   ‘~/tmp/scratch/RtmpVejDiG’ ‘~/tmp/scratch/RtmpWim3Ts’   ‘~/tmp/scratch/RtmpX3c3SP’ ‘~/tmp/scratch/RtmpX6CKvc’   ‘~/tmp/scratch/RtmpX7VFan’ ‘~/tmp/scratch/RtmpX9A51V’   ‘~/tmp/scratch/RtmpXb4Kc0’ ‘~/tmp/scratch/RtmpXbYYYV’   ‘~/tmp/scratch/RtmpY1jubP’ ‘~/tmp/scratch/RtmpYGPqN0’   ‘~/tmp/scratch/RtmpYGX5Mb’ ‘~/tmp/scratch/RtmpYPzU2I’   ‘~/tmp/scratch/RtmpYXJr92’ ‘~/tmp/scratch/RtmpZIBXq0’   ‘~/tmp/scratch/Rtmpa8KILX’ ‘~/tmp/scratch/Rtmpa94W8L’   ‘~/tmp/scratch/RtmpaCp5Fz’ ‘~/tmp/scratch/RtmpaPtzk6’   ‘~/tmp/scratch/RtmpaT1Sge’ ‘~/tmp/scratch/RtmpagxNIw’   ‘~/tmp/scratch/RtmpbSA49a’ ‘~/tmp/scratch/RtmpbYm54W’   ‘~/tmp/scratch/RtmpcEEjTS’ ‘~/tmp/scratch/RtmpdA3N9C’   ‘~/tmp/scratch/RtmpdMSY9W’ ‘~/tmp/scratch/Rtmpdm5FBL’   ‘~/tmp/scratch/Rtmpds8Gl5’ ‘~/tmp/scratch/RtmpeIWpNM’   ‘~/tmp/scratch/RtmpfEBfQr’ ‘~/tmp/scratch/RtmpgCeJKy’   ‘~/tmp/scratch/RtmpgFLTX5’ ‘~/tmp/scratch/Rtmpgg1uIp’   ‘~/tmp/scratch/RtmphgfEgs’ ‘~/tmp/scratch/Rtmpi4XC48’   ‘~/tmp/scratch/Rtmpi7mlLL’ ‘~/tmp/scratch/RtmpiDVBto’   ‘~/tmp/scratch/RtmpilPKmS’ ‘~/tmp/scratch/RtmpjIyp45’   ‘~/tmp/scratch/RtmpjsW3hV’ ‘~/tmp/scratch/RtmplwZK5N’   ‘~/tmp/scratch/RtmpmBPxJi’ ‘~/tmp/scratch/RtmpmOaYVq’   ‘~/tmp/scratch/Rtmpma9TEs’ ‘~/tmp/scratch/Rtmpn24bya’   ‘~/tmp/scratch/Rtmpn8mC8Z’ ‘~/tmp/scratch/RtmpnlkIY7’   ‘~/tmp/scratch/RtmpoAWVoE’ ‘~/tmp/scratch/RtmpoR1tr1’   ‘~/tmp/scratch/RtmpoqKROc’ ‘~/tmp/scratch/Rtmpov43mH’   ‘~/tmp/scratch/RtmpoxeorC’ ‘~/tmp/scratch/RtmppSLzvM’   ‘~/tmp/scratch/RtmppuPlnN’ ‘~/tmp/scratch/Rtmpq7Fu34’   ‘~/tmp/scratch/RtmpqJhENi’ ‘~/tmp/scratch/RtmpqNvK55’   ‘~/tmp/scratch/RtmpqU1ZoI’ ‘~/tmp/scratch/RtmpqrBzwh’   ‘~/tmp/scratch/RtmpqstVyI’ ‘~/tmp/scratch/RtmprTTKdm’   ‘~/tmp/scratch/RtmprfMV6E’ ‘~/tmp/scratch/RtmpsaIagy’   ‘~/tmp/scratch/Rtmpswj4wV’ ‘~/tmp/scratch/Rtmpt0pUBL’   ‘~/tmp/scratch/RtmptDi2pK’ ‘~/tmp/scratch/RtmptH3ADT’   ‘~/tmp/scratch/RtmptYh97j’ ‘~/tmp/scratch/RtmptvfIEE’   ‘~/tmp/scratch/RtmpuCWrTL’ ‘~/tmp/scratch/RtmpuKYu2j’   ‘~/tmp/scratch/RtmpuUbo9X’ ‘~/tmp/scratch/Rtmpv453x1’   ‘~/tmp/scratch/RtmpvcJX1M’ ‘~/tmp/scratch/RtmpviUC7f’   ‘~/tmp/scratch/RtmpwrqCoA’ ‘~/tmp/scratch/Rtmpx82svC’   ‘~/tmp/scratch/RtmpxKSvI7’ ‘~/tmp/scratch/RtmpxmL0ZY’   ‘~/tmp/scratch/RtmpyGYu1Y’ ‘~/tmp/scratch/RtmpzrVNtu’   ‘~/tmp/scratch/xvfb-run.1bpOWe’ ‘~/tmp/scratch/xvfb-run.30IPX1’   ‘~/tmp/scratch/xvfb-run.3AzDE0’ ‘~/tmp/scratch/xvfb-run.4kZgRa’   ‘~/tmp/scratch/xvfb-run.66JwUs’ ‘~/tmp/scratch/xvfb-run.8U96Kk’   ‘~/tmp/scratch/xvfb-run.8ajgZy’ ‘~/tmp/scratch/xvfb-run.8pjbR5’   ‘~/tmp/scratch/xvfb-run.9lWfDA’ ‘~/tmp/scratch/xvfb-run.9zrd6k’   ‘~/tmp/scratch/xvfb-run.AA9D9w’ ‘~/tmp/scratch/xvfb-run.AI0nTT’   ‘~/tmp/scratch/xvfb-run.AJlbB7’ ‘~/tmp/scratch/xvfb-run.B8laFg’   ‘~/tmp/scratch/xvfb-run.BE9kLO’ ‘~/tmp/scratch/xvfb-run.DtRv6w’   ‘~/tmp/scratch/xvfb-run.E4XLS9’ ‘~/tmp/scratch/xvfb-run.EvgRCJ’   ‘~/tmp/scratch/xvfb-run.FNCjSG’ ‘~/tmp/scratch/xvfb-run.FXgaOk’   ‘~/tmp/scratch/xvfb-run.G5c7SZ’ ‘~/tmp/scratch/xvfb-run.GuL2zL’   ‘~/tmp/scratch/xvfb-run.HZQMbI’ ‘~/tmp/scratch/xvfb-run.J56Zbu’   ‘~/tmp/scratch/xvfb-run.KTKZSK’ ‘~/tmp/scratch/xvfb-run.Kp0Zhm’   ‘~/tmp/scratch/xvfb-run.KrXvT7’ ‘~/tmp/scratch/xvfb-run.LOBNvk’   ‘~/tmp/scratch/xvfb-run.MYfiUg’ ‘~/tmp/scratch/xvfb-run.OLutrd’   ‘~/tmp/scratch/xvfb-run.P2saQ9’ ‘~/tmp/scratch/xvfb-run.P7jyMl’   ‘~/tmp/scratch/xvfb-run.QA5cZt’ ‘~/tmp/scratch/xvfb-run.QKAMXr’   ‘~/tmp/scratch/xvfb-run.QWaOdP’ ‘~/tmp/scratch/xvfb-run.QfaWkW’   ‘~/tmp/scratch/xvfb-run.S7tonV’ ‘~/tmp/scratch/xvfb-run.SaTkml’   ‘~/tmp/scratch/xvfb-run.Tdngyq’ ‘~/tmp/scratch/xvfb-run.W4KlTS’   ‘~/tmp/scratch/xvfb-run.Y8YZ8b’ ‘~/tmp/scratch/xvfb-run.Zjx6Pd’   ‘~/tmp/scratch/xvfb-run.aanzBn’ ‘~/tmp/scratch/xvfb-run.aznmzh’   ‘~/tmp/scratch/xvfb-run.cNWowd’ ‘~/tmp/scratch/xvfb-run.caJgcC’   ‘~/tmp/scratch/xvfb-run.eV39n7’ ‘~/tmp/scratch/xvfb-run.emxAQu’   ‘~/tmp/scratch/xvfb-run.h6oxCf’ ‘~/tmp/scratch/xvfb-run.m1LETb’   ‘~/tmp/scratch/xvfb-run.mawDFe’ ‘~/tmp/scratch/xvfb-run.nUuYTY’   ‘~/tmp/scratch/xvfb-run.nVLs4c’ ‘~/tmp/scratch/xvfb-run.nw0HLP’   ‘~/tmp/scratch/xvfb-run.oARf5i’ ‘~/tmp/scratch/xvfb-run.olPyIj’   ‘~/tmp/scratch/xvfb-run.p7IHGW’ ‘~/tmp/scratch/xvfb-run.pBbAkg’   ‘~/tmp/scratch/xvfb-run.qjJhKe’ ‘~/tmp/scratch/xvfb-run.qjTItX’   ‘~/tmp/scratch/xvfb-run.sbkESA’ ‘~/tmp/scratch/xvfb-run.somJKF’   ‘~/tmp/scratch/xvfb-run.tFlvEB’ ‘~/tmp/scratch/xvfb-run.th6CAN’   ‘~/tmp/scratch/xvfb-run.uo5wkM’ ‘~/tmp/scratch/xvfb-run.uyEt3N’   ‘~/tmp/scratch/xvfb-run.wNFaiV’ ‘~/tmp/scratch/xvfb-run.wru9N5’   ‘~/tmp/scratch/xvfb-run.xACBwg’ ‘~/tmp/scratch/xvfb-run.y754in’   ‘~/tmp/scratch/xvfb-run.yqpSWA’ ‘~/tmp/scratch/xvfb-run.zkRHWs’   ‘~/tmp/scratch/xvfb-run.zqOIL9’ ‘~/tmp/scratch/xvfb-run.ztbpGd’
• DONE

Status: 3 NOTEs