* installing to library ‘/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages’ * installing *source* package ‘FLSSS’ ... ** package ‘FLSSS’ successfully unpacked and MD5 sums checked ** using staged installation checking whether the C++ compiler works... yes checking for C++ compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C++ compiler... yes checking whether g++-13 -std=gnu++17 accepts -g... yes checking how to run the C++ preprocessor... g++-13 -std=gnu++17 -E checking for gcc... gcc-13 checking whether we are using the GNU C compiler... yes checking whether gcc-13 accepts -g... yes checking for gcc-13 option to accept ISO C89... none needed checking whether we are using the GNU C++ compiler... (cached) yes checking whether g++-13 -std=gnu++17 accepts -g... (cached) yes checking for grep that handles long lines and -e... /usr/bin/grep checking for egrep... /usr/bin/grep -E checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking gmp.h usability... yes checking gmp.h presence... yes checking for gmp.h... yes checking for __gmpz_init in -lgmp... yes configure: creating ./config.status config.status: creating src/Makevars ** libs using C++ compiler: ‘g++-13 (Debian 13.2.0-23) 13.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmpmu2iol/R.INSTALLe12e92425c2ba/FLSSS/src' g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppParallel/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -I. -DGMP -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -DR_BUILD -fpic -g -O2 -Wall -pedantic -mtune=native -c BaB01kp.cpp -o BaB01kp.o cc1plus: warning: command-line option ‘-Wstrict-prototypes’ is valid for C/ObjC but not for C++ g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppParallel/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -I. -DGMP -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -DR_BUILD -fpic -g -O2 -Wall -pedantic -mtune=native -c BaBgapMulthreadKPs.cpp -o BaBgapMulthreadKPs.o cc1plus: warning: command-line option ‘-Wstrict-prototypes’ is valid for C/ObjC but not for C++ g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppParallel/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -I. -DGMP -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -DR_BUILD -fpic -g -O2 -Wall -pedantic -mtune=native -c BaBgapMulthreadNodes.cpp -o BaBgapMulthreadNodes.o cc1plus: warning: command-line option ‘-Wstrict-prototypes’ is valid for C/ObjC but not for C++ g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppParallel/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -I. -DGMP -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -DR_BUILD -fpic -g -O2 -Wall -pedantic -mtune=native -c DP01kp.cpp -o DP01kp.o cc1plus: warning: command-line option ‘-Wstrict-prototypes’ is valid for C/ObjC but not for C++ g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppParallel/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -I. -DGMP -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -DR_BUILD -fpic -g -O2 -Wall -pedantic -mtune=native -c DPgapMultithreadKPs.cpp -o DPgapMultithreadKPs.o cc1plus: warning: command-line option ‘-Wstrict-prototypes’ is valid for C/ObjC but not for C++ g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppParallel/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -I. -DGMP -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -DR_BUILD -fpic -g -O2 -Wall -pedantic -mtune=native -c DPgapMultithreadNodes.cpp -o DPgapMultithreadNodes.o cc1plus: warning: command-line option ‘-Wstrict-prototypes’ is valid for C/ObjC but not for C++ g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppParallel/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -I. -DGMP -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -DR_BUILD -fpic -g -O2 -Wall -pedantic -mtune=native -c GAP.cpp -o GAP.o cc1plus: warning: command-line option ‘-Wstrict-prototypes’ is valid for C/ObjC but not for C++ g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppParallel/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -I. -DGMP -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -DR_BUILD -fpic -g -O2 -Wall -pedantic -mtune=native -c GAgap.cpp -o GAgap.o cc1plus: warning: command-line option ‘-Wstrict-prototypes’ is valid for C/ObjC but not for C++ g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppParallel/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -I. -DGMP -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -DR_BUILD -fpic -g -O2 -Wall -pedantic -mtune=native -c Gknapsack.cpp -o Gknapsack.o cc1plus: warning: command-line option ‘-Wstrict-prototypes’ is valid for C/ObjC but not for C++ g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppParallel/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -I. -DGMP -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -DR_BUILD -fpic -g -O2 -Wall -pedantic -mtune=native -c RcppExports.cpp -o RcppExports.o cc1plus: warning: command-line option ‘-Wstrict-prototypes’ is valid for C/ObjC but not for C++ g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppParallel/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -I. -DGMP -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -DR_BUILD -fpic -g -O2 -Wall -pedantic -mtune=native -c findBoundInterface.cpp -o findBoundInterface.o cc1plus: warning: command-line option ‘-Wstrict-prototypes’ is valid for C/ObjC but not for C++ g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppParallel/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -I. -DGMP -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -DR_BUILD -fpic -g -O2 -Wall -pedantic -mtune=native -c flsss.cpp -o flsss.o cc1plus: warning: command-line option ‘-Wstrict-prototypes’ is valid for C/ObjC but not for C++ g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppParallel/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -I. -DGMP -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -DR_BUILD -fpic -g -O2 -Wall -pedantic -mtune=native -c flsssVariableTree.cpp -o flsssVariableTree.o cc1plus: warning: command-line option ‘-Wstrict-prototypes’ is valid for C/ObjC but not for C++ g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppParallel/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -I. -DGMP -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -DR_BUILD -fpic -g -O2 -Wall -pedantic -mtune=native -c mflsss.cpp -o mflsss.o cc1plus: warning: command-line option ‘-Wstrict-prototypes’ is valid for C/ObjC but not for C++ g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppParallel/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -I. -DGMP -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -DR_BUILD -fpic -g -O2 -Wall -pedantic -mtune=native -c mflsssArb.cpp -o mflsssArb.o cc1plus: warning: command-line option ‘-Wstrict-prototypes’ is valid for C/ObjC but not for C++ In file included from /usr/include/c++/13/bits/specfun.h:43, from /usr/include/c++/13/cmath:3699, from /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include/Rcpp/platform/compiler.h:100, from /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include/Rcpp/r/headers.h:62, from /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include/RcppCommon.h:30, from /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include/Rcpp.h:27, from arbitraryDimFLSSS/mflsssDecomp.hpp:4, from mflsssArb.cpp:3: In function ‘typename __gnu_cxx::__enable_if::__value, void>::__type std::__fill_a1(_ForwardIterator, _ForwardIterator, const _Tp&) [with _ForwardIterator = unsigned int*; _Tp = int]’, inlined from ‘void std::__fill_a(_FIte, _FIte, const _Tp&) [with _FIte = unsigned int*; _Tp = int]’ at /usr/include/c++/13/bits/stl_algobase.h:977:21, inlined from ‘void std::fill(_ForwardIterator, _ForwardIterator, const _Tp&) [with _ForwardIterator = unsigned int*; _Tp = int]’ at /usr/include/c++/13/bits/stl_algobase.h:1007:20, inlined from ‘void mulHint32(uint32_t*, int, uint32_t*, int, uint32_t*, int)’ at arbitraryDimFLSSS/arithmetic.hpp:39:12, inlined from ‘void AdjustStringVec::bitIntsToHugeInts64(std::vector&, std::vector&)’ at arbitraryDimFLSSS/intString2intArray.hpp:319:16: /usr/include/c++/13/bits/stl_algobase.h:931:18: warning: ‘void* __builtin_memset(void*, int, long unsigned int)’ specified bound between 18446744073441116164 and 18446744073709551612 exceeds maximum object size 9223372036854775807 [-Wstringop-overflow=] 931 | *__first = __tmp; | ~~~~~~~~~^~~~~~~ In function ‘typename __gnu_cxx::__enable_if::__value, void>::__type std::__fill_a1(_ForwardIterator, _ForwardIterator, const _Tp&) [with _ForwardIterator = unsigned int*; _Tp = int]’, inlined from ‘void std::__fill_a(_FIte, _FIte, const _Tp&) [with _FIte = unsigned int*; _Tp = int]’ at /usr/include/c++/13/bits/stl_algobase.h:977:21, inlined from ‘void std::fill(_ForwardIterator, _ForwardIterator, const _Tp&) [with _ForwardIterator = unsigned int*; _Tp = int]’ at /usr/include/c++/13/bits/stl_algobase.h:1007:20, inlined from ‘void mulHint32(uint32_t*, int, uint32_t*, int, uint32_t*, int)’ at arbitraryDimFLSSS/arithmetic.hpp:39:12, inlined from ‘void AdjustStringVec::bitIntsToHugeInts64(std::vector&, std::vector&)’ at arbitraryDimFLSSS/intString2intArray.hpp:323:16: /usr/include/c++/13/bits/stl_algobase.h:931:18: warning: ‘void* __builtin_memset(void*, int, long unsigned int)’ specified bound between 18446744073441116164 and 18446744073709551612 exceeds maximum object size 9223372036854775807 [-Wstringop-overflow=] 931 | *__first = __tmp; | ~~~~~~~~~^~~~~~~ g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppParallel/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -I. -DGMP -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -DR_BUILD -fpic -g -O2 -Wall -pedantic -mtune=native -c mflsssComoPar.cpp -o mflsssComoPar.o cc1plus: warning: command-line option ‘-Wstrict-prototypes’ is valid for C/ObjC but not for C++ g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppParallel/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -I. -DGMP -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -DR_BUILD -fpic -g -O2 -Wall -pedantic -mtune=native -c mflsssDecomp.cpp -o mflsssDecomp.o cc1plus: warning: command-line option ‘-Wstrict-prototypes’ is valid for C/ObjC but not for C++ g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppParallel/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -I. -DGMP -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -DR_BUILD -fpic -g -O2 -Wall -pedantic -mtune=native -c mflsssVariableTree.cpp -o mflsssVariableTree.o cc1plus: warning: command-line option ‘-Wstrict-prototypes’ is valid for C/ObjC but not for C++ g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppParallel/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -I. -DGMP -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -DR_BUILD -fpic -g -O2 -Wall -pedantic -mtune=native -c testIntegerize.cpp -o testIntegerize.o cc1plus: warning: command-line option ‘-Wstrict-prototypes’ is valid for C/ObjC but not for C++ g++-13 -std=gnu++17 -shared -L/home/hornik/tmp/R.check/r-devel-gcc/Work/build/lib -Wl,-O1 -o FLSSS.so BaB01kp.o BaBgapMulthreadKPs.o BaBgapMulthreadNodes.o DP01kp.o DPgapMultithreadKPs.o DPgapMultithreadNodes.o GAP.o GAgap.o Gknapsack.o RcppExports.o findBoundInterface.o flsss.o flsssVariableTree.o mflsss.o mflsssArb.o mflsssComoPar.o mflsssDecomp.o mflsssVariableTree.o testIntegerize.o -llapack -L/home/hornik/tmp/R.check/r-devel-gcc/Work/build/lib -lRblas -lgfortran -lm -lquadmath -lgmp -L/home/hornik/tmp/R.check/r-devel-gcc/Work/build/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmpmu2iol/R.INSTALLe12e92425c2ba/FLSSS/src' make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmpmu2iol/R.INSTALLe12e92425c2ba/FLSSS/src' make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmpmu2iol/R.INSTALLe12e92425c2ba/FLSSS/src' installing to /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/00LOCK-FLSSS/00new/FLSSS/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * creating tarball packaged installation of ‘FLSSS’ as ‘FLSSS_9.1.3_R_x86_64-pc-linux-gnu.tar.gz’ * DONE (FLSSS)