* installing to library ‘/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages’
* installing *source* package ‘ClusVis’ ...
** package ‘ClusVis’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C++ compiler: ‘g++-13 (Debian 13.2.0-23) 13.2.0’
make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpeVJSeS/R.INSTALL23424a50ad2584/ClusVis/src'
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/mvtnorm/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native   -c RcppExports.cpp -o RcppExports.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/mvtnorm/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native   -c clusvis.cpp -o clusvis.o
clusvis.cpp: In function ‘arma::Row<double> convertMatToVec(arma::Mat<double>)’:
clusvis.cpp:29:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const unsigned int’} [-Wsign-compare]
   29 |   for (int j=0; j<mat.n_cols; j++){
      |                 ~^~~~~~~~~~~
clusvis.cpp:30:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
   30 |     for (int i=j; i<(mat.n_rows-1); i++){
      |                   ~^~~~~~~~~~~~~~~
clusvis.cpp: In function ‘arma::Row<double> computeGradient(const arma::Col<double>&, const arma::Mat<double>&, const arma::Mat<double>&)’:
clusvis.cpp:107:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const unsigned int’} [-Wsign-compare]
  107 |   for (int k=0; k<grr.n_cols; k++)
      |                 ~^~~~~~~~~~~
clusvis.cpp:113:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const unsigned int’} [-Wsign-compare]
  113 |   for (int i=0; i<(loguref.n_rows); i++)
      |                 ~^~~~~~~~~~~~~~~~~
clusvis.cpp: In function ‘Rcpp::NumericVector computeLikelihoodCPP(Rcpp::NumericVector, Rcpp::NumericVector, Rcpp::NumericMatrix, Rcpp::NumericMatrix)’:
clusvis.cpp:159:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<double>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  159 |   for (int j=0; j<prop.size(); j++) prop[j] = Rprop[j];
      |                 ~^~~~~~~~~~~~
g++-13 -std=gnu++17 -shared -L/home/hornik/tmp/R.check/r-devel-gcc/Work/build/lib -Wl,-O1 -o ClusVis.so RcppExports.o clusvis.o -llapack -L/home/hornik/tmp/R.check/r-devel-gcc/Work/build/lib -lRblas -lgfortran -lm -lquadmath -L/home/hornik/tmp/R.check/r-devel-gcc/Work/build/lib -lR
make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpeVJSeS/R.INSTALL23424a50ad2584/ClusVis/src'
make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpeVJSeS/R.INSTALL23424a50ad2584/ClusVis/src'
make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpeVJSeS/R.INSTALL23424a50ad2584/ClusVis/src'
installing to /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/00LOCK-ClusVis/00new/ClusVis/libs
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* creating tarball
packaged installation of ‘ClusVis’ as ‘ClusVis_1.2.0_R_x86_64-pc-linux-gnu.tar.gz’
* DONE (ClusVis)