* installing to library ‘/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages’ * installing *source* package ‘BipartiteModularityMaximization’ ... ** package ‘BipartiteModularityMaximization’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘g++-13 (Debian 13.2.0-23) 13.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpxCqSQ8/R.INSTALLb563e63bcc064/BipartiteModularityMaximization/src' g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c CoClust_allInOne.cpp -o CoClust_allInOne.o CoClust_allInOne.cpp: In function ‘comstruct barber(double (*)(), int, double**, int, int)’: CoClust_allInOne.cpp:48:15: warning: unused variable ‘l’ [-Wunused-variable] 48 | int i, j, l, ii, flag=0, n, ng,ngtemp,gstemp, nn, np; | ^ CoClust_allInOne.cpp: In function ‘double BBbisection(double (*)(), double**, int*, int*, int)’: CoClust_allInOne.cpp:226:20: warning: unused variable ‘nn’ [-Wunused-variable] 226 | int i,j,l, nn=0, np=0, na=0, nt=0, min, flag=0; | ^~ CoClust_allInOne.cpp:226:26: warning: unused variable ‘np’ [-Wunused-variable] 226 | int i,j,l, nn=0, np=0, na=0, nt=0, min, flag=0; | ^~ CoClust_allInOne.cpp:227:16: warning: unused variable ‘x0’ [-Wunused-variable] 227 | double x0,x,bik,dQ, xa, xt; | ^~ CoClust_allInOne.cpp:227:19: warning: unused variable ‘x’ [-Wunused-variable] 227 | double x0,x,bik,dQ, xa, xt; | ^ CoClust_allInOne.cpp:227:21: warning: unused variable ‘bik’ [-Wunused-variable] 227 | double x0,x,bik,dQ, xa, xt; | ^~~ CoClust_allInOne.cpp: In function ‘double BBKLtuning(double (*)(), double**, int*, int, int)’: CoClust_allInOne.cpp:417:19: warning: unused variable ‘k’ [-Wunused-variable] 417 | int i, j, k, p, r, n; | ^ CoClust_allInOne.cpp: In function ‘void invertrans(int**, int, int*, int*, int**)’: CoClust_allInOne.cpp:883:19: warning: variable ‘temp’ set but not used [-Wunused-but-set-variable] 883 | int i,j,k,temp,flag=0; | ^~~~ CoClust_allInOne.cpp: In function ‘double BBKLtuning(double (*)(), double**, int*, int, int)’: CoClust_allInOne.cpp:471:17: warning: ‘p’ may be used uninitialized [-Wmaybe-uninitialized] 471 | if (p==1) { | ^~ CoClust_allInOne.cpp:417:22: note: ‘p’ was declared here 417 | int i, j, k, p, r, n; | ^ CoClust_allInOne.cpp: In function ‘double BBFinaltuning(double (*)(), double**, int**, int, int, int*)’: CoClust_allInOne.cpp:637:50: warning: ‘p’ may be used uninitialized [-Wmaybe-uninitialized] 637 | p++; | ~^~ CoClust_allInOne.cpp:559:20: note: ‘p’ was declared here 559 | int i,j,k, p, r, n; | ^ CoClust_allInOne.cpp: In function ‘double BBAgglomeration(double**, int, int, int*, int*, int**)’: CoClust_allInOne.cpp:826:25: warning: ‘R’ may be used uninitialized [-Wmaybe-uninitialized] 826 | con_to_G(config[R],n,ng,gs,G); | ^ CoClust_allInOne.cpp:767:25: note: ‘R’ was declared here 767 | int i,j,k,ii,jj,R,commnum,g1,g2,n; | ^ CoClust_allInOne.cpp:808:39: warning: ‘g1’ may be used uninitialized [-Wmaybe-uninitialized] 808 | con[j]=g1; | ~~~~~~^~~ CoClust_allInOne.cpp:767:35: note: ‘g1’ was declared here 767 | int i,j,k,ii,jj,R,commnum,g1,g2,n; | ^~ CoClust_allInOne.cpp:807:25: warning: ‘g2’ may be used uninitialized [-Wmaybe-uninitialized] 807 | if (con[j]==g2) | ^~ CoClust_allInOne.cpp:767:38: note: ‘g2’ was declared here 767 | int i,j,k,ii,jj,R,commnum,g1,g2,n; | ^~ g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c RcppExports.cpp -o RcppExports.o g++-13 -std=gnu++17 -shared -L/home/hornik/tmp/R.check/r-devel-gcc/Work/build/lib -Wl,-O1 -o BipartiteModularityMaximization.so CoClust_allInOne.o RcppExports.o -L/home/hornik/tmp/R.check/r-devel-gcc/Work/build/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpxCqSQ8/R.INSTALLb563e63bcc064/BipartiteModularityMaximization/src' make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpxCqSQ8/R.INSTALLb563e63bcc064/BipartiteModularityMaximization/src' make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpxCqSQ8/R.INSTALLb563e63bcc064/BipartiteModularityMaximization/src' installing to /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/00LOCK-BipartiteModularityMaximization/00new/BipartiteModularityMaximization/libs ** R ** data *** moving datasets to lazyload DB ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * creating tarball packaged installation of ‘BipartiteModularityMaximization’ as ‘BipartiteModularityMaximization_1.23.120.1_R_x86_64-pc-linux-gnu.tar.gz’ * DONE (BipartiteModularityMaximization)