* installing to library ‘/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages’
* installing *source* package ‘BClustLonG’ ...
** package ‘BClustLonG’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C++ compiler: ‘g++-13 (Debian 13.2.0-23) 13.2.0’
using C++11
make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpNk7ZUt/R.INSTALL2a59594cf6f91a/BClustLonG/src'
g++-13 -std=gnu++11 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native   -c RcppExports.cpp -o RcppExports.o
g++-13 -std=gnu++11 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native   -c sparseFactor.cpp -o sparseFactor.o
sparseFactor.cpp: In function ‘arma::mat samLamV2Cpp(arma::mat, arma::mat, arma::vec, arma::mat, arma::mat, arma::rowvec)’:
sparseFactor.cpp:90:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const unsigned int’} [-Wsign-compare]
   90 |     for(int i=0; i < lam.n_rows; i++){
      |                  ~~^~~~~~~~~~~~
sparseFactor.cpp: In function ‘arma::mat calSim(arma::mat)’:
sparseFactor.cpp:207:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
  207 |     for(int i=0;i < mat.n_cols-1;i++){
      |                 ~~^~~~~~~~~~~~~~
sparseFactor.cpp:208:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const unsigned int’} [-Wsign-compare]
  208 |         for(int j =i+1; j < mat.n_cols; j++){
      |                         ~~^~~~~~~~~~~~
g++-13 -std=gnu++11 -shared -L/home/hornik/tmp/R.check/r-devel-gcc/Work/build/lib -Wl,-O1 -o BClustLonG.so RcppExports.o sparseFactor.o -llapack -L/home/hornik/tmp/R.check/r-devel-gcc/Work/build/lib -lRblas -lgfortran -lm -lquadmath -L/home/hornik/tmp/R.check/r-devel-gcc/Work/build/lib -lR
make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpNk7ZUt/R.INSTALL2a59594cf6f91a/BClustLonG/src'
make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpNk7ZUt/R.INSTALL2a59594cf6f91a/BClustLonG/src'
make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpNk7ZUt/R.INSTALL2a59594cf6f91a/BClustLonG/src'
installing to /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/00LOCK-BClustLonG/00new/BClustLonG/libs
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* creating tarball
packaged installation of ‘BClustLonG’ as ‘BClustLonG_0.1.3_R_x86_64-pc-linux-gnu.tar.gz’
* DONE (BClustLonG)