* installing to library ‘/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages’
* installing *source* package ‘BCSub’ ...
** package ‘BCSub’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C compiler: ‘gcc-13 (Debian 13.2.0-23) 13.2.0’
using C++ compiler: ‘g++-13 (Debian 13.2.0-23) 13.2.0’
make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpzWlTUD/R.INSTALL18a12ceb10c14/BCSub/src'
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native   -c RcppExports.cpp -o RcppExports.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native   -c factor_DP_fun.cpp -o factor_DP_fun.o
factor_DP_fun.cpp: In function ‘arma::mat calSim(arma::mat)’:
factor_DP_fun.cpp:31:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
   31 |     for(int i=0;i < mat.n_cols-1;i++){
      |                 ~~^~~~~~~~~~~~~~
factor_DP_fun.cpp:32:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const unsigned int’} [-Wsign-compare]
   32 |         for(int j =i+1; j < mat.n_cols; j++){
      |                         ~~^~~~~~~~~~~~
factor_DP_fun.cpp: In function ‘arma::mat samLamV3Cpp(arma::mat, arma::mat, arma::vec, double, arma::mat)’:
factor_DP_fun.cpp:56:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const unsigned int’} [-Wsign-compare]
   56 |     for(int i=1; i < lam.n_rows; i++){
      |                  ~~^~~~~~~~~~~~
factor_DP_fun.cpp:58:14: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const unsigned int’} [-Wsign-compare]
   58 |         if(i < lam.n_cols){
      |            ~~^~~~~~~~~~~~
gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c init.c -o init.o
g++-13 -std=gnu++17 -shared -L/home/hornik/tmp/R.check/r-devel-gcc/Work/build/lib -Wl,-O1 -o BCSub.so RcppExports.o factor_DP_fun.o init.o -llapack -L/home/hornik/tmp/R.check/r-devel-gcc/Work/build/lib -lRblas -lgfortran -lm -lquadmath -L/home/hornik/tmp/R.check/r-devel-gcc/Work/build/lib -lR
make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpzWlTUD/R.INSTALL18a12ceb10c14/BCSub/src'
make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpzWlTUD/R.INSTALL18a12ceb10c14/BCSub/src'
make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpzWlTUD/R.INSTALL18a12ceb10c14/BCSub/src'
installing to /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/00LOCK-BCSub/00new/BCSub/libs
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* creating tarball
packaged installation of ‘BCSub’ as ‘BCSub_0.5_R_x86_64-pc-linux-gnu.tar.gz’
* DONE (BCSub)