* installing to library ‘/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages’ * installing *source* package ‘Apollonius’ ... ** package ‘Apollonius’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘g++-13 (Debian 13.2.0-23) 13.2.0’ using C++17 make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpAkNfCk/R.INSTALL296ef973eaeeb8/Apollonius/src' g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppCGAL/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -DCGAL_HEADER_ONLY=1 -fpic -g -O2 -Wall -pedantic -mtune=native -c Apollonius.cpp -o Apollonius.o In file included from /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/cstdfloat.hpp:27, from /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/multiprecision/detail/float128_functions.hpp:15, from /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/multiprecision/detail/fpclassify.hpp:13, from /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/multiprecision/detail/default_ops.hpp:15, from /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/multiprecision/detail/generic_interconvert.hpp:12, from /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/multiprecision/number.hpp:12, from /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppCGAL/include/CGAL/boost_mp.h:42, from /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppCGAL/include/CGAL/Number_types/internal/Exact_type_selector.h:27, from /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppCGAL/include/CGAL/Exact_kernel_selector.h:26, from /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppCGAL/include/CGAL/Filtered_kernel.h:22, from /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppCGAL/include/CGAL/Exact_predicates_inexact_constructions_kernel.h:21, from Apollonius.cpp:7: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/math/cstdfloat/cstdfloat_cmath.hpp:714:16: warning: non-standard suffix on floating constant [-Wpedantic] 714 | else if (x == BOOST_FLOAT128_C(0.0)) | ^~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/math/cstdfloat/cstdfloat_cmath.hpp:717:16: warning: non-standard suffix on floating constant [-Wpedantic] 717 | if (::BOOST_CSTDFLOAT_FLOAT128_FABS(x) < BOOST_CSTDFLOAT_FLOAT128_MIN) | ^~ In file included from /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/mpl/aux_/na_assert.hpp:23, from /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/mpl/arg.hpp:25, from /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/mpl/placeholders.hpp:24, from /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/iterator/iterator_categories.hpp:16, from /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/iterator/iterator_adaptor.hpp:14, from /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/iterator/transform_iterator.hpp:13, from /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppCGAL/include/CGAL/boost/iterator/transform_iterator.hpp:27, from /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppCGAL/include/CGAL/Coercion_traits.h:28, from /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppCGAL/include/CGAL/number_type_basic.h:35, from /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppCGAL/include/CGAL/basic.h:28, from /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppCGAL/include/CGAL/Apollonius_graph_2/basic.h:19, from /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppCGAL/include/CGAL/Apollonius_graph_2.h:32, from Apollonius.cpp:3: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/mpl/assert.hpp:194:21: warning: unnecessary parentheses in declaration of ‘assert_arg’ [-Wparentheses] 194 | failed ************ (Pred::************ | ^~~~~~~~~~~~~~~~~~~ 195 | assert_arg( void (*)(Pred), typename assert_arg_pred::type ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 | ); | ~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/mpl/assert.hpp:194:21: note: remove parentheses 194 | failed ************ (Pred::************ | ^~~~~~~~~~~~~~~~~~~ | - 195 | assert_arg( void (*)(Pred), typename assert_arg_pred::type ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 | ); | ~ | - /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/mpl/assert.hpp:199:21: warning: unnecessary parentheses in declaration of ‘assert_not_arg’ [-Wparentheses] 199 | failed ************ (boost::mpl::not_::************ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 | assert_not_arg( void (*)(Pred), typename assert_arg_pred_not::type ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 | ); | ~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/mpl/assert.hpp:199:21: note: remove parentheses 199 | failed ************ (boost::mpl::not_::************ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | - 200 | assert_not_arg( void (*)(Pred), typename assert_arg_pred_not::type ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 | ); | ~ | - In file included from /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/smart_ptr/shared_ptr.hpp:18, from /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/property_map/vector_property_map.hpp:14, from /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/property_map/property_map.hpp:598, from /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppCGAL/include/CGAL/property_map.h:18, from /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppCGAL/include/CGAL/Spatial_sort_traits_adapter_2.h:19, from /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppCGAL/include/CGAL/Triangulation_2.h:38, from /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppCGAL/include/CGAL/Apollonius_graph_2.h:34: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/smart_ptr/detail/shared_count.hpp:361:33: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 361 | explicit shared_count( std::auto_ptr & r ): pi_( new sp_counted_impl_p( r.get() ) ) | ^~~~~~~~ In file included from /usr/include/c++/13/bits/std_thread.h:43, from /usr/include/c++/13/thread:45, from /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppCGAL/include/CGAL/config.h:425, from /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppCGAL/include/CGAL/license/Apollonius_graph_2.h:17, from /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppCGAL/include/CGAL/Apollonius_graph_2.h:18: /usr/include/c++/13/bits/unique_ptr.h:65:28: note: declared here 65 | template class auto_ptr; | ^~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/smart_ptr/shared_ptr.hpp:251:65: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 251 | template< class T, class R > struct sp_enable_if_auto_ptr< std::auto_ptr< T >, R > | ^~~~~~~~ /usr/include/c++/13/bits/unique_ptr.h:65:28: note: declared here 65 | template class auto_ptr; | ^~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/smart_ptr/shared_ptr.hpp:508:31: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 508 | explicit shared_ptr( std::auto_ptr & r ): px(r.get()), pn() | ^~~~~~~~ /usr/include/c++/13/bits/unique_ptr.h:65:28: note: declared here 65 | template class auto_ptr; | ^~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/smart_ptr/shared_ptr.hpp:521:22: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 521 | shared_ptr( std::auto_ptr && r ): px(r.get()), pn() | ^~~~~~~~ /usr/include/c++/13/bits/unique_ptr.h:65:28: note: declared here 65 | template class auto_ptr; | ^~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/smart_ptr/shared_ptr.hpp:604:34: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 604 | shared_ptr & operator=( std::auto_ptr & r ) | ^~~~~~~~ /usr/include/c++/13/bits/unique_ptr.h:65:28: note: declared here 65 | template class auto_ptr; | ^~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/smart_ptr/shared_ptr.hpp:613:34: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 613 | shared_ptr & operator=( std::auto_ptr && r ) | ^~~~~~~~ /usr/include/c++/13/bits/unique_ptr.h:65:28: note: declared here 65 | template class auto_ptr; | ^~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/smart_ptr/shared_ptr.hpp: In member function ‘boost::shared_ptr& boost::shared_ptr::operator=(std::auto_ptr<_Up>&&)’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/smart_ptr/shared_ptr.hpp:615:38: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 615 | this_type( static_cast< std::auto_ptr && >( r ) ).swap( *this ); | ^~~~~~~~ /usr/include/c++/13/bits/unique_ptr.h:65:28: note: declared here 65 | template class auto_ptr; | ^~~~~~~~ In file included from /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/Core:205, from /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppCGAL/include/CGAL/Dimension.h:20, from /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppCGAL/include/CGAL/Bbox_2.h:22, from /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppCGAL/include/CGAL/basic_classes.h:23, from /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppCGAL/include/CGAL/Cartesian/Cartesian_base.h:21, from /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppCGAL/include/CGAL/Simple_cartesian.h:20, from /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppCGAL/include/CGAL/Exact_predicates_inexact_constructions_kernel.h:20: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h: At global scope: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:46:40: warning: ignoring attributes on template argument ‘__m128i’ [-Wignored-attributes] 46 | typedef eigen_packet_wrapper<__m128i, 0> Packet4i; | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:47:40: warning: ignoring attributes on template argument ‘__m128i’ [-Wignored-attributes] 47 | typedef eigen_packet_wrapper<__m128i, 1> Packet16b; | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:49:39: warning: ignoring attributes on template argument ‘__m128’ [-Wignored-attributes] 49 | template<> struct is_arithmetic<__m128> { enum { value = true }; }; | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:50:40: warning: ignoring attributes on template argument ‘__m128i’ [-Wignored-attributes] 50 | template<> struct is_arithmetic<__m128i> { enum { value = true }; }; | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:51:40: warning: ignoring attributes on template argument ‘__m128d’ [-Wignored-attributes] 51 | template<> struct is_arithmetic<__m128d> { enum { value = true }; }; | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:222:43: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes] 222 | template<> struct unpacket_traits { | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:228:43: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes] 228 | template<> struct unpacket_traits { | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:1124:34: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes] 1124 | ptranspose(PacketBlock& kernel) { | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:1129:34: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes] 1129 | ptranspose(PacketBlock& kernel) { | ^ In file included from /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/Core:174: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:16:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes] 16 | struct conj_helper { \ | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:173:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’ 173 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet2cf,Packet4f) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes] 29 | struct conj_helper { \ | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:173:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’ 173 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet2cf,Packet4f) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:16:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes] 16 | struct conj_helper { \ | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:298:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’ 298 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet1cd,Packet2d) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes] 29 | struct conj_helper { \ | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:298:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’ 298 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet1cd,Packet2d) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppCGAL/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -DCGAL_HEADER_ONLY=1 -fpic -g -O2 -Wall -pedantic -mtune=native -c RcppExports.cpp -o RcppExports.o In file included from /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/Core:205, from /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/Dense:1, from /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/RcppEigenForward.h:28, from /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/RcppEigen.h:25, from RcppExports.cpp:4: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:46:40: warning: ignoring attributes on template argument ‘__m128i’ [-Wignored-attributes] 46 | typedef eigen_packet_wrapper<__m128i, 0> Packet4i; | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:47:40: warning: ignoring attributes on template argument ‘__m128i’ [-Wignored-attributes] 47 | typedef eigen_packet_wrapper<__m128i, 1> Packet16b; | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:49:39: warning: ignoring attributes on template argument ‘__m128’ [-Wignored-attributes] 49 | template<> struct is_arithmetic<__m128> { enum { value = true }; }; | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:50:40: warning: ignoring attributes on template argument ‘__m128i’ [-Wignored-attributes] 50 | template<> struct is_arithmetic<__m128i> { enum { value = true }; }; | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:51:40: warning: ignoring attributes on template argument ‘__m128d’ [-Wignored-attributes] 51 | template<> struct is_arithmetic<__m128d> { enum { value = true }; }; | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:222:43: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes] 222 | template<> struct unpacket_traits { | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:228:43: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes] 228 | template<> struct unpacket_traits { | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:1124:34: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes] 1124 | ptranspose(PacketBlock& kernel) { | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:1129:34: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes] 1129 | ptranspose(PacketBlock& kernel) { | ^ In file included from /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/Core:174: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:16:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes] 16 | struct conj_helper { \ | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:173:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’ 173 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet2cf,Packet4f) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes] 29 | struct conj_helper { \ | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:173:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’ 173 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet2cf,Packet4f) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:16:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes] 16 | struct conj_helper { \ | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:298:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’ 298 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet1cd,Packet2d) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes] 29 | struct conj_helper { \ | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:298:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’ 298 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet1cd,Packet2d) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/Core:165: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from ‘struct Eigen::internal::traits >’ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:266:49: required from ‘struct Eigen::internal::traits >’ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:24:46: required from here /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes] /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(4) float>::half’ {aka ‘__m128’} [-Wignored-attributes] /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes] 208 | typedef typename find_best_packet_helper::type>::type type; | ^~~~ In file included from /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/Core:271: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase, 1>’ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase, 3>’ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase >’ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase >’ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase >’ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from ‘class Eigen::Matrix’ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:46:50: required from ‘class Eigen::QuaternionBase >’ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:273:7: required from ‘class Eigen::Quaternion’ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:27:3: required from here /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from ‘struct Eigen::internal::traits >’ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:266:49: required from ‘struct Eigen::internal::traits >’ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:98:47: required from here /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 208 | typedef typename find_best_packet_helper::type>::type type; | ^~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase, 1>’ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase, 3>’ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase >’ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase >’ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase >’ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from ‘class Eigen::Matrix’ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:46:50: required from ‘class Eigen::QuaternionBase >’ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:273:7: required from ‘class Eigen::Quaternion’ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:102:3: required from here /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ In file included from /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/SparseCore:37, from /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/Sparse:26, from /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/RcppEigenForward.h:29: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h: In instantiation of ‘class Eigen::SparseMatrixBase >’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:36:7: required from ‘class Eigen::SparseCompressedBase >’ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:96:7: required from ‘class Eigen::SparseMatrix’ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/ConstrainedConjGrad.h:61:25: required from here /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 47 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ g++-13 -std=gnu++17 -shared -L/home/hornik/tmp/R.check/r-devel-gcc/Work/build/lib -Wl,-O1 -o Apollonius.so Apollonius.o RcppExports.o -lmpfr -lgmp -L/home/hornik/tmp/R.check/r-devel-gcc/Work/build/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpAkNfCk/R.INSTALL296ef973eaeeb8/Apollonius/src' make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpAkNfCk/R.INSTALL296ef973eaeeb8/Apollonius/src' make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpAkNfCk/R.INSTALL296ef973eaeeb8/Apollonius/src' installing to /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/00LOCK-Apollonius/00new/Apollonius/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * creating tarball packaged installation of ‘Apollonius’ as ‘Apollonius_1.0.1_R_x86_64-pc-linux-gnu.tar.gz’ * DONE (Apollonius)