* using log directory ‘/home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/urbin.Rcheck’
* using R Under development (unstable) (2024-04-29 r86495)
* using platform: x86_64-pc-linux-gnu
* R was compiled by
    Debian clang version 18.1.4 (1)
    Debian flang-new version 18.1.4 (1)
* running under: Debian GNU/Linux trixie/sid
* using session charset: UTF-8
* checking for file ‘urbin/DESCRIPTION’ ... OK
* this is package ‘urbin’ version ‘0.1-12’
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for executable files ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking serialization versions ... OK
* checking whether package ‘urbin’ can be installed ... OK
See 'https://www.r-project.org/nosvn/R.check/r-devel-linux-x86_64-debian-clang/urbin-00install.html' for details.
* checking package directory ... OK
* checking for future file timestamps ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... [0s/1s] OK
* checking whether the package can be loaded with stated dependencies ... [0s/0s] OK
* checking whether the package can be unloaded cleanly ... [0s/0s] OK
* checking whether the namespace can be loaded with stated dependencies ... [0s/0s] OK
* checking whether the namespace can be unloaded cleanly ... [0s/0s] OK
* checking loading without being on the library search path ... [0s/0s] OK
* checking use of S3 registration ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... [8s/11s] OK
* checking Rd files ... [0s/1s] OK
* checking Rd metadata ... OK
* checking Rd line widths ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking sizes of PDF files under ‘inst/doc’ ... OK
* checking installed files from ‘inst/doc’ ... OK
* checking files in ‘vignettes’ ... OK
* checking examples ... [3s/4s] OK
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ... [41s/51s] OK
  Running ‘logit.R’ [4s/6s]
  Comparing ‘logit.Rout’ to ‘logit.Rout.save’ ...39a40,43
> Deviance Residuals: 
>    Min      1Q  Median      3Q     Max  
> -1.873  -1.232   0.803   1.056   1.587  
> 
137a142,145
> Deviance Residuals: 
>    Min      1Q  Median      3Q     Max  
> -1.899  -1.232   0.789   1.051   1.649  
> 
292a301,304
> 
> Deviance Residuals: 
>    Min      1Q  Median      3Q     Max  
> -1.874  -1.216   0.805   1.067   1.722  
  Running ‘logitEffCat.R’ [0s/0s]
  Comparing ‘logitEffCat.Rout’ to ‘logitEffCat.Rout.save’ ... OK
  Running ‘logitEffInt.R’ [0s/1s]
  Comparing ‘logitEffInt.Rout’ to ‘logitEffInt.Rout.save’ ... OK
  Running ‘logitEla.R’ [0s/0s]
  Comparing ‘logitEla.Rout’ to ‘logitEla.Rout.save’ ... OK
  Running ‘logitElaInt.R’ [0s/0s]
  Comparing ‘logitElaInt.Rout’ to ‘logitElaInt.Rout.save’ ... OK
  Running ‘lpm.R’ [3s/3s]
  Comparing ‘lpm.Rout’ to ‘lpm.Rout.save’ ... OK
  Running ‘mlogit.R’ [8s/9s]
  Comparing ‘mlogit.Rout’ to ‘mlogit.Rout.save’ ... OK
  Running ‘mvprobit.R’ [16s/20s]
  Comparing ‘mvprobit.Rout’ to ‘mvprobit.Rout.save’ ... OK
  Running ‘oprobit.R’ [4s/4s]
  Comparing ‘oprobit.Rout’ to ‘oprobit.Rout.save’ ... OK
  Running ‘probit.R’ [4s/5s]
  Comparing ‘probit.Rout’ to ‘probit.Rout.save’ ...39a40,43
> Deviance Residuals: 
>    Min      1Q  Median      3Q     Max  
> -1.895  -1.234   0.802   1.059   1.589  
> 
137a142,145
> Deviance Residuals: 
>    Min      1Q  Median      3Q     Max  
> -1.927  -1.231   0.785   1.053   1.654  
> 
292a301,304
> 
> Deviance Residuals: 
>    Min      1Q  Median      3Q     Max  
> -1.897  -1.215   0.804   1.069   1.729  
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes ... OK
* checking re-building of vignette outputs ... [45s/58s] OK
* checking PDF version of manual ... [5s/7s] OK
* checking HTML version of manual ... [1s/1s] OK
* checking for non-standard things in the check directory ... OK
* DONE
Status: OK