* installing to library ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages’
* installing *source* package ‘seqinr’ ...
** package ‘seqinr’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C compiler: ‘Debian clang version 18.1.4 (1)’
make[1]: Entering directory '/tmp/RtmpWe9Xat/R.INSTALLe57524660376a/seqinr/src'
clang-18 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3  -DUSE_TYPE_CHECKING_STRICT -fpic  -g -O3 -Wall -pedantic -c alignment.c -o alignment.o
clang-18 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3  -DUSE_TYPE_CHECKING_STRICT -fpic  -g -O3 -Wall -pedantic -c fastacc.c -o fastacc.o
clang-18 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3  -DUSE_TYPE_CHECKING_STRICT -fpic  -g -O3 -Wall -pedantic -c getzlibsock.c -o getzlibsock.o
clang-18 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3  -DUSE_TYPE_CHECKING_STRICT -fpic  -g -O3 -Wall -pedantic -c kaks.c -o kaks.o
kaks.c:966:2: warning: misleading indentation; statement is not part of the previous 'for' [-Wmisleading-indentation]
  966 |         for(i= 0; i<=20; i++) rl[0][i] = rl[i][0] = minrl;
      |         ^
kaks.c:962:1: note: previous statement is here
  962 | for(i=1; i<=20; i++)
      | ^
1 warning generated.
clang-18 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3  -DUSE_TYPE_CHECKING_STRICT -fpic  -g -O3 -Wall -pedantic -c packagename_init.c -o packagename_init.o
clang-18 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3  -DUSE_TYPE_CHECKING_STRICT -fpic  -g -O3 -Wall -pedantic -c util.c -o util.o
clang-18 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3  -DUSE_TYPE_CHECKING_STRICT -fpic  -g -O3 -Wall -pedantic -c zsockr.c -o zsockr.o
clang-18 -shared -L/home/hornik/tmp/R.check/r-devel-clang/Work/build/lib -Wl,-O1 -o seqinr.so alignment.o fastacc.o getzlibsock.o kaks.o packagename_init.o util.o zsockr.o -lz -L/home/hornik/tmp/R.check/r-devel-clang/Work/build/lib -lR
make[1]: Leaving directory '/tmp/RtmpWe9Xat/R.INSTALLe57524660376a/seqinr/src'
make[1]: Entering directory '/tmp/RtmpWe9Xat/R.INSTALLe57524660376a/seqinr/src'
make[1]: Leaving directory '/tmp/RtmpWe9Xat/R.INSTALLe57524660376a/seqinr/src'
installing to /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/00LOCK-seqinr/00new/seqinr/libs
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
*** copying figures
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (seqinr)