* installing to library ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages’
* installing *source* package ‘seqest’ ...
** package ‘seqest’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C++ compiler: ‘Debian clang version 18.1.4 (1)’
using C++11
make[1]: Entering directory '/tmp/RtmpImkER0/R.INSTALL1ec2726d3d681b/seqest/src'
clang++-18 -std=gnu++11 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3    -fpic  -g -O3 -Wall -pedantic -Wno-error=enum-constexpr-conversion  -c A_optimal_cat.cpp -o A_optimal_cat.o
clang++-18 -std=gnu++11 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3    -fpic  -g -O3 -Wall -pedantic -Wno-error=enum-constexpr-conversion  -c A_optimal_ord.cpp -o A_optimal_ord.o
clang++-18 -std=gnu++11 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3    -fpic  -g -O3 -Wall -pedantic -Wno-error=enum-constexpr-conversion  -c D_optimal.cpp -o D_optimal.o
D_optimal.cpp:54:18: warning: using integer absolute value function 'abs' when argument is of floating point type [-Wabsolute-value]
   54 |     mu_eta[i] = (abs(eta[i]) > thres)? DBL_EPSILON: exp(eta[i])/pow(1 + exp(eta[i]), 2);
      |                  ^
D_optimal.cpp:54:18: note: use function 'std::abs' instead
   54 |     mu_eta[i] = (abs(eta[i]) > thres)? DBL_EPSILON: exp(eta[i])/pow(1 + exp(eta[i]), 2);
      |                  ^~~
      |                  std::abs
1 warning generated.
clang++-18 -std=gnu++11 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3    -fpic  -g -O3 -Wall -pedantic -Wno-error=enum-constexpr-conversion  -c QIC.cpp -o QIC.o
QIC.cpp:53:18: warning: using integer absolute value function 'abs' when argument is of floating point type [-Wabsolute-value]
   53 |     mu_eta[i] = (abs(eta[i]) > thres)? DBL_EPSILON: exp(eta[i])/pow(1 + exp(eta[i]), 2);
      |                  ^
QIC.cpp:53:18: note: use function 'std::abs' instead
   53 |     mu_eta[i] = (abs(eta[i]) > thres)? DBL_EPSILON: exp(eta[i])/pow(1 + exp(eta[i]), 2);
      |                  ^~~
      |                  std::abs
1 warning generated.
clang++-18 -std=gnu++11 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3    -fpic  -g -O3 -Wall -pedantic -Wno-error=enum-constexpr-conversion  -c RcppExports.cpp -o RcppExports.o
clang++-18 -std=gnu++11 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3    -fpic  -g -O3 -Wall -pedantic -Wno-error=enum-constexpr-conversion  -c getMH.cpp -o getMH.o
getMH.cpp:53:18: warning: using integer absolute value function 'abs' when argument is of floating point type [-Wabsolute-value]
   53 |     mu_eta[i] = (abs(eta[i]) > thres)? DBL_EPSILON: exp(eta[i])/pow(1 + exp(eta[i]), 2);
      |                  ^
getMH.cpp:53:18: note: use function 'std::abs' instead
   53 |     mu_eta[i] = (abs(eta[i]) > thres)? DBL_EPSILON: exp(eta[i])/pow(1 + exp(eta[i]), 2);
      |                  ^~~
      |                  std::abs
1 warning generated.
clang++-18 -std=gnu++11 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3    -fpic  -g -O3 -Wall -pedantic -Wno-error=enum-constexpr-conversion  -c getWH.cpp -o getWH.o
clang++-18 -std=gnu++11 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3    -fpic  -g -O3 -Wall -pedantic -Wno-error=enum-constexpr-conversion  -c getWH_ord.cpp -o getWH_ord.o
clang++-18 -std=gnu++11 -shared -L/home/hornik/tmp/R.check/r-devel-clang/Work/build/lib -Wl,-O1 -o seqest.so A_optimal_cat.o A_optimal_ord.o D_optimal.o QIC.o RcppExports.o getMH.o getWH.o getWH_ord.o -llapack -L/home/hornik/tmp/R.check/r-devel-clang/Work/build/lib -lRblas -L/usr/lib/llvm-18/lib -lFortran_main -lFortranRuntime -lFortranDecimal -lm -L/home/hornik/tmp/R.check/r-devel-clang/Work/build/lib -lR
make[1]: Leaving directory '/tmp/RtmpImkER0/R.INSTALL1ec2726d3d681b/seqest/src'
make[1]: Entering directory '/tmp/RtmpImkER0/R.INSTALL1ec2726d3d681b/seqest/src'
make[1]: Leaving directory '/tmp/RtmpImkER0/R.INSTALL1ec2726d3d681b/seqest/src'
installing to /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/00LOCK-seqest/00new/seqest/libs
** R
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (seqest)