* using log directory ‘/home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/rlibkriging.Rcheck’ * using R Under development (unstable) (2024-04-27 r86487) * using platform: x86_64-pc-linux-gnu * R was compiled by Debian clang version 18.1.4 (1) Debian flang-new version 18.1.4 (1) * running under: Debian GNU/Linux trixie/sid * using session charset: UTF-8 * checking for file ‘rlibkriging/DESCRIPTION’ ... OK * checking extension type ... Package * this is package ‘rlibkriging’ version ‘0.8-0.1’ * package encoding: UTF-8 * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for executable files ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking whether package ‘rlibkriging’ can be installed ... OK See 'https://www.r-project.org/nosvn/R.check/r-devel-linux-x86_64-debian-clang/rlibkriging-00install.html' for details. * used C++ compiler: ‘Debian clang version 18.1.4 (1)’ * checking C++ specification ... OK Not all R platforms support C++17 * checking package directory ... OK * checking for future file timestamps ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking code files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... [1s/1s] OK * checking whether the package can be loaded with stated dependencies ... [1s/1s] OK * checking whether the package can be unloaded cleanly ... [1s/1s] OK * checking whether the namespace can be loaded with stated dependencies ... [1s/1s] OK * checking whether the namespace can be unloaded cleanly ... [1s/1s] OK * checking loading without being on the library search path ... [1s/1s] OK * checking use of S3 registration ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... [13s/17s] OK * checking Rd files ... [1s/2s] OK * checking Rd metadata ... OK * checking Rd line widths ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking line endings in shell scripts ... OK * checking line endings in C/C++/Fortran sources/headers ... OK * checking line endings in Makefiles ... OK * checking compilation flags in Makevars ... OK * checking for GNU extensions in Makefiles ... NOTE GNU make is a SystemRequirements. * checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK * checking use of PKG_*FLAGS in Makefiles ... OK * checking use of SHLIB_OPENMP_*FLAGS in Makefiles ... OK * checking include directives in Makefiles ... OK * checking pragmas in C/C++ headers and code ... OK * checking compilation flags used ... OK * checking compiled code ... OK * checking examples ... [3s/4s] OK * checking for unstated dependencies in ‘tests’ ... OK * checking tests ... [351s/435s] OK Running ‘test-KrigingFit.R’ [9s/11s] Running ‘test-KrigingLeaveOneOut.R’ [5s/6s] Running ‘test-KrigingLeaveOneOut_3d.R’ [3s/4s] Running ‘test-KrigingLogLik.R’ [7s/9s] Running ‘test-KrigingLogLikGradHess.R’ [16s/20s] Running ‘test-KrigingMethods.R’ [11s/14s] Running ‘test-KrigingPredict.R’ [101s/123s] Running ‘test-NoiseKrigingFit.R’ [9s/11s] Running ‘test-NoiseKrigingLogLik.R’ [12s/14s] Running ‘test-NoiseKrigingMethods.R’ [9s/10s] Running ‘test-NoiseKrigingPredict.R’ [33s/37s] Running ‘test-NuggetKrigingFit.R’ [10s/12s] Running ‘test-NuggetKrigingLogLik.R’ [12s/14s] Running ‘test-NuggetKrigingLogMargPost.R’ [17s/22s] Running ‘test-NuggetKrigingMethods.R’ [9s/12s] Running ‘test-NuggetKrigingPredict.R’ [34s/49s] Running ‘test-RobustGaSP-Nugget.R’ [3s/5s] Running ‘test-RobustGaSP.R’ [5s/7s] Running ‘test-RobustGaSPvsKrigingLMP.R’ [4s/4s] Running ‘test-RobustGaSPvsNuggetKrigingLMP.R’ [4s/4s] Running ‘test-SaveLoad.R’ [3s/4s] Running ‘test-asDiceKriging.R’ [21s/27s] Running ‘test-estimnone.R’ [4s/5s] Running ‘test-normalize.R’ [6s/8s] Running ‘test-rlibkriging-demo.R’ [1s/2s] * checking PDF version of manual ... [9s/13s] OK * checking HTML version of manual ... [5s/7s] OK * checking for non-standard things in the check directory ... OK * DONE Status: 1 NOTE