* using log directory ‘/home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/rcbayes.Rcheck’ * using R Under development (unstable) (2024-04-27 r86487) * using platform: x86_64-pc-linux-gnu * R was compiled by Debian clang version 18.1.4 (1) Debian flang-new version 18.1.4 (1) * running under: Debian GNU/Linux trixie/sid * using session charset: UTF-8 * checking for file ‘rcbayes/DESCRIPTION’ ... OK * this is package ‘rcbayes’ version ‘0.2.0’ * package encoding: UTF-8 * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for executable files ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking serialization versions ... OK * checking whether package ‘rcbayes’ can be installed ... OK See 'https://www.r-project.org/nosvn/R.check/r-devel-linux-x86_64-debian-clang/rcbayes-00install.html' for details. * used C++ compiler: ‘Debian clang version 18.1.4 (1)’ * checking C++ specification ... OK Not all R platforms support C++17 * checking package directory ... OK * checking for future file timestamps ... OK * checking ‘build’ directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking code files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... [7s/8s] OK * checking whether the package can be loaded with stated dependencies ... [6s/7s] OK * checking whether the package can be unloaded cleanly ... [6s/7s] OK * checking whether the namespace can be loaded with stated dependencies ... [6s/8s] OK * checking whether the namespace can be unloaded cleanly ... [6s/8s] OK * checking loading without being on the library search path ... [12s/14s] OK * checking use of S3 registration ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... [30s/34s] OK * checking Rd files ... [12s/16s] NOTE checkRd: (-1) mig_calculate_rc.Rd:28: Lost braces; missing escapes or markup? 28 | \item pre-working age: {a1, alpha1} | ^ checkRd: (-1) mig_calculate_rc.Rd:29: Lost braces; missing escapes or markup? 29 | \item working age: {a2, alpha2, mu2, lambda2} | ^ checkRd: (-1) mig_calculate_rc.Rd:30: Lost braces; missing escapes or markup? 30 | \item retirement: {a3, alpha3, mu3, lambda3} | ^ checkRd: (-1) mig_calculate_rc.Rd:31: Lost braces; missing escapes or markup? 31 | \item post retirement: {a4, lambda4} | ^ * checking Rd metadata ... OK * checking Rd line widths ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking line endings in shell scripts ... OK * checking line endings in C/C++/Fortran sources/headers ... OK * checking line endings in Makefiles ... OK * checking compilation flags in Makevars ... OK * checking for GNU extensions in Makefiles ... NOTE GNU make is a SystemRequirements. * checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK * checking use of PKG_*FLAGS in Makefiles ... OK * checking use of SHLIB_OPENMP_*FLAGS in Makefiles ... OK * checking pragmas in C/C++ headers and code ... OK * checking compilation flags used ... OK * checking compiled code ... OK * checking installed files from ‘inst/doc’ ... OK * checking files in ‘vignettes’ ... OK * checking examples ... [17s/23s] OK Examples with CPU (user + system) or elapsed time > 5s user system elapsed mig_estimate_rc 4.846 0.127 7.279 * checking for unstated dependencies in vignettes ... OK * checking package vignettes ... OK * checking re-building of vignette outputs ... [34s/44s] OK * checking PDF version of manual ... [5s/7s] OK * checking HTML version of manual ... [1s/1s] OK * checking for non-standard things in the check directory ... OK * DONE Status: 2 NOTEs