* installing to library ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages’ * installing *source* package ‘pcaL1’ ... ** package ‘pcaL1’ successfully unpacked and MD5 sums checked ** using staged installation checking for gcc... clang-18 checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether the compiler supports GNU C... yes checking whether clang-18 accepts -g... yes checking for clang-18 option to enable C11 features... none needed checking how to run the C preprocessor... clang-18 -E checking for pkg-config... /usr/bin/pkg-config configure: set compile and link flags according to pkg-config configure: compile flags are -I/usr/include/coin configure: link flags are -lClpSolver -lClp -lCoinUtils -lbz2 -lz -llapack -lblas -lm checking for stdio.h... yes checking for stdlib.h... yes checking for string.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for strings.h... yes checking for sys/stat.h... yes checking for sys/types.h... yes checking for unistd.h... yes checking for stdbool.h... yes checking for Clp_C_Interface.h... yes checking for library containing Clp_newModel... none required checking for library containing Clp_setRowName... none required configure: creating ./config.status config.status: creating src/Makevars ** libs using C compiler: ‘Debian clang version 18.1.4 (1)’ make[1]: Entering directory '/tmp/RtmpbE0KrN/R.INSTALL6f0b81d857163/pcaL1/src' clang-18 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I/usr/include/coin -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c init.c -o init.o clang-18 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I/usr/include/coin -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c l1pca.c -o l1pca.o clang-18 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I/usr/include/coin -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c l1pca_R.c -o l1pca_R.o clang-18 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I/usr/include/coin -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c l1pcahp.c -o l1pcahp.o clang-18 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I/usr/include/coin -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c l1pcahp_R.c -o l1pcahp_R.o clang-18 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I/usr/include/coin -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c l1pcastar.c -o l1pcastar.o l1pcastar.c:20:7: warning: variable 'numprojdim' set but not used [-Wunused-but-set-variable] 20 | int numprojdim = probleminfo->numprojdim; | ^ 1 warning generated. clang-18 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I/usr/include/coin -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c l1pcastar_R.c -o l1pcastar_R.o clang-18 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I/usr/include/coin -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c l1projection.c -o l1projection.o clang-18 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I/usr/include/coin -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c l1projection_R.c -o l1projection_R.o clang-18 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I/usr/include/coin -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c pcal1.c -o pcal1.o clang-18 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I/usr/include/coin -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c pcal1_R.c -o pcal1_R.o clang-18 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I/usr/include/coin -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c pcalp.c -o pcalp.o clang-18 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I/usr/include/coin -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c pcalp_R.c -o pcalp_R.o clang-18 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I/usr/include/coin -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c sharpel1pca.c -o sharpel1pca.o clang-18 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I/usr/include/coin -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c sharpel1pca_R.c -o sharpel1pca_R.o clang-18 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I/usr/include/coin -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c sharpel1rs.c -o sharpel1rs.o clang-18 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I/usr/include/coin -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c sharpel1rs_R.c -o sharpel1rs_R.o clang-18 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I/usr/include/coin -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c sparsel1pca.c -o sparsel1pca.o clang-18 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I/usr/include/coin -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c sparsel1pca_R.c -o sparsel1pca_R.o clang-18 -shared -L/home/hornik/tmp/R.check/r-devel-clang/Work/build/lib -Wl,-O1 -o pcaL1.so init.o l1pca.o l1pca_R.o l1pcahp.o l1pcahp_R.o l1pcastar.o l1pcastar_R.o l1projection.o l1projection_R.o pcal1.o pcal1_R.o pcalp.o pcalp_R.o sharpel1pca.o sharpel1pca_R.o sharpel1rs.o sharpel1rs_R.o sparsel1pca.o sparsel1pca_R.o -lClpSolver -lClp -lCoinUtils -lbz2 -lz -llapack -lblas -lm -llapack -L/home/hornik/tmp/R.check/r-devel-clang/Work/build/lib -lRblas -L/usr/lib/llvm-18/lib -lFortran_main -lFortranRuntime -lFortranDecimal -lm -L/home/hornik/tmp/R.check/r-devel-clang/Work/build/lib -lR make[1]: Leaving directory '/tmp/RtmpbE0KrN/R.INSTALL6f0b81d857163/pcaL1/src' make[1]: Entering directory '/tmp/RtmpbE0KrN/R.INSTALL6f0b81d857163/pcaL1/src' make[1]: Leaving directory '/tmp/RtmpbE0KrN/R.INSTALL6f0b81d857163/pcaL1/src' installing to /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/00LOCK-pcaL1/00new/pcaL1/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (pcaL1)