* using log directory ‘/home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/ordgam.Rcheck’ * using R Under development (unstable) (2024-04-29 r86495) * using platform: x86_64-pc-linux-gnu * R was compiled by Debian clang version 18.1.4 (1) Debian flang-new version 18.1.4 (1) * running under: Debian GNU/Linux trixie/sid * using session charset: UTF-8 * checking for file ‘ordgam/DESCRIPTION’ ... OK * checking extension type ... Package * this is package ‘ordgam’ version ‘0.9.1’ * package encoding: UTF-8 * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for executable files ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking whether package ‘ordgam’ can be installed ... OK See 'https://www.r-project.org/nosvn/R.check/r-devel-linux-x86_64-debian-clang/ordgam-00install.html' for details. * checking package directory ... OK * checking for future file timestamps ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking code files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... [0s/0s] OK * checking whether the package can be loaded with stated dependencies ... [0s/0s] OK * checking whether the package can be unloaded cleanly ... [0s/0s] OK * checking whether the namespace can be loaded with stated dependencies ... [0s/0s] OK * checking whether the namespace can be unloaded cleanly ... [0s/0s] OK * checking loading without being on the library search path ... [0s/0s] OK * checking use of S3 registration ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... [11s/14s] OK * checking Rd files ... [1s/1s] NOTE checkRd: (-1) SNapprox.Rd:17: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) SNapprox.Rd:18: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) STapprox.Rd:17: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) STapprox.Rd:18: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) centeredBasis.gen.Rd:23: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) centeredBasis.gen.Rd:24: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) centeredBasis.gen.Rd:25: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) centeredBasis.gen.Rd:26: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) centeredBasis.gen.Rd:27: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) ordgam.object.Rd:9: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) ordgam.object.Rd:10: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) ordgam.object.Rd:11: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) ordgam.object.Rd:12: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) ordgam.object.Rd:13: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) ordgam.object.Rd:14: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) ordgam.object.Rd:15: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) ordgam.object.Rd:16: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) ordgam.object.Rd:17: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) ordgam.object.Rd:18: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) ordgam.object.Rd:19: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) ordgam.object.Rd:20: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) ordgam.object.Rd:21: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) ordgam.object.Rd:22: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) ordgam.object.Rd:23: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) ordgam.object.Rd:24: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) ordgam.object.Rd:25: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) ordgam.object.Rd:26: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) ordgam.object.Rd:27: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) ordgam.object.Rd:28: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) ordgam.object.Rd:29: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) ordgam.object.Rd:30: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) ordgam.object.Rd:31: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) ordgam.object.Rd:32: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) ordgam.object.Rd:33: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) ordgam.object.Rd:34: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) ordgam.object.Rd:35: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) ordgam.object.Rd:36: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) ordgam.object.Rd:37: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) ordgam.object.Rd:38: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) ordgam.object.Rd:39: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) ordgam.object.Rd:40: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) ordgam.object.Rd:41: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) ordgam.object.Rd:42: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) ordgam.object.Rd:43: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) ordgam.object.Rd:44: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) ordgam.object.Rd:45: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) ordgam.object.Rd:46: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) ordgam.object.Rd:47: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) ordgam.object.Rd:48: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) ordgam.object.Rd:49: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) ordgam.object.Rd:50: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) ordgam.object.Rd:51: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) ordgam_additive.Rd:19: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) ordgam_additive.Rd:20: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) ordgam_additive.Rd:21: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) ordgam_additive.Rd:22: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) ordgam_additive.Rd:23: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) ordgam_additive.Rd:24: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) ordgam_additive.Rd:25: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) ordgam_additive.Rd:26: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) ordgam_additive.Rd:27: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) ordregr.object.Rd:9: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) ordregr.object.Rd:10: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) ordregr.object.Rd:11: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) ordregr.object.Rd:12: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) ordregr.object.Rd:13: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) ordregr.object.Rd:14: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) ordregr.object.Rd:15: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) ordregr.object.Rd:16: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) ordregr.object.Rd:17: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) ordregr.object.Rd:18: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) ordregr.object.Rd:19: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) ordregr.object.Rd:20: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) ordregr.object.Rd:21: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) ordregr.object.Rd:22: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) ordregr.object.Rd:23: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) ordregr.object.Rd:24: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) ordregr.object.Rd:25: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) ordregr.object.Rd:26: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) ordregr.object.Rd:27: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) ordregr.object.Rd:28: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) ordregr.object.Rd:29: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) ordregr.object.Rd:30: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) ordregr_lpost.Rd:38: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) ordregr_lpost.Rd:39: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) ordregr_lpost.Rd:40: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) ordregr_lpost.Rd:41: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) ordregr_lpost.Rd:42: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) ordregr_lpost.Rd:43: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) ordregr_lpost.Rd:44: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) ordregr_lpost.Rd:45: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) testStat.Rd:25: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) testStat.Rd:26: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) testStat.Rd:27: Lost braces in \itemize; \value handles \item{}{} directly * checking Rd metadata ... OK * checking Rd line widths ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking contents of ‘data’ directory ... OK * checking data for non-ASCII characters ... [0s/1s] OK * checking LazyData ... OK * checking data for ASCII and uncompressed saves ... OK * checking examples ... [66s/80s] OK Examples with CPU (user + system) or elapsed time > 5s user system elapsed ordgam 13.010 0.007 16.419 print.ordregr 12.546 0.012 14.267 plot.ordgam 12.514 0.008 14.818 lpost.gamma 12.342 0.008 15.654 ordgam_additive 12.298 0.004 15.094 * checking PDF version of manual ... [6s/9s] OK * checking HTML version of manual ... [1s/2s] OK * checking for non-standard things in the check directory ... OK * DONE Status: 1 NOTE