* using log directory ‘/home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/glmtrans.Rcheck’ * using R Under development (unstable) (2024-04-27 r86487) * using platform: x86_64-pc-linux-gnu * R was compiled by Debian clang version 18.1.4 (1) Debian flang-new version 18.1.4 (1) * running under: Debian GNU/Linux trixie/sid * using session charset: UTF-8 * checking for file ‘glmtrans/DESCRIPTION’ ... OK * checking extension type ... Package * this is package ‘glmtrans’ version ‘2.0.0’ * package encoding: UTF-8 * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for executable files ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking whether package ‘glmtrans’ can be installed ... OK See 'https://www.r-project.org/nosvn/R.check/r-devel-linux-x86_64-debian-clang/glmtrans-00install.html' for details. * checking package directory ... OK * checking for future file timestamps ... OK * checking ‘build’ directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking code files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... [5s/7s] OK * checking whether the package can be loaded with stated dependencies ... [5s/6s] OK * checking whether the package can be unloaded cleanly ... [5s/6s] OK * checking whether the namespace can be loaded with stated dependencies ... [5s/6s] OK * checking whether the namespace can be unloaded cleanly ... [6s/7s] OK * checking loading without being on the library search path ... [6s/7s] OK * checking use of S3 registration ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... [30s/36s] OK * checking Rd files ... [0s/1s] NOTE checkRd: (-1) glmtrans.Rd:83: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) glmtrans.Rd:84: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) glmtrans.Rd:85: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) glmtrans.Rd:86: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) glmtrans.Rd:87: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) predict.glmtrans.Rd:23: Lost braces in \itemize; meant \describe ? checkRd: (-1) predict.glmtrans.Rd:24: Lost braces in \itemize; meant \describe ? checkRd: (-1) predict.glmtrans.Rd:25: Lost braces in \itemize; meant \describe ? checkRd: (-1) predict.glmtrans.Rd:26: Lost braces in \itemize; meant \describe ? * checking Rd metadata ... OK * checking Rd line widths ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking sizes of PDF files under ‘inst/doc’ ... OK * checking installed files from ‘inst/doc’ ... OK * checking files in ‘vignettes’ ... OK * checking examples ... [32s/38s] OK Examples with CPU (user + system) or elapsed time > 5s user system elapsed plot.glmtrans 6.524 0.154 7.552 print.glmtrans 5.503 0.031 6.175 predict.glmtrans 4.952 0.021 5.739 glmtrans 4.809 0.099 5.876 * checking for unstated dependencies in vignettes ... OK * checking package vignettes ... OK * checking re-building of vignette outputs ... [33s/34s] OK * checking PDF version of manual ... [6s/8s] OK * checking HTML version of manual ... [1s/2s] OK * checking for non-standard things in the check directory ... OK * DONE Status: 1 NOTE