* installing to library ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages’ * installing *source* package ‘gllvm’ ... ** package ‘gllvm’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘Debian clang version 18.1.4 (1)’ make[1]: Entering directory '/tmp/RtmptX9ZLJ/R.INSTALLd9c47762617e4/gllvm/src' clang++-18 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -DTMBAD_FRAMEWORK -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/TMB/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c gllvm.cpp -o gllvm.o In file included from gllvm.cpp:2: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/TMB/include/TMB.hpp:96: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/Sparse:26: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/SparseCore:61: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable] 273 | Index count = 0; | ^ In file included from gllvm.cpp:2: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/TMB/include/TMB.hpp:96: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/Sparse:29: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/SparseLU:35: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable] 78 | Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree | ^ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable] 79 | Index nsuper_et = 0; // Number of relaxed snodes in the original etree | ^ gllvm.cpp:310:16: warning: equality comparison with extraneous parentheses [-Wparentheses-equality] 310 | if((random(0)==0)){ | ~~~~~~~~~^~~ gllvm.cpp:310:16: note: remove extraneous parentheses around the comparison to silence this warning 310 | if((random(0)==0)){ | ~ ^ ~ gllvm.cpp:310:16: note: use '=' to turn this equality comparison into an assignment 310 | if((random(0)==0)){ | ^~ | = gllvm.cpp:310:16: warning: equality comparison with extraneous parentheses [-Wparentheses-equality] 310 | if((random(0)==0)){ | ~~~~~~~~~^~~ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/TMB/include/tmb_core.hpp:1277:6: note: in instantiation of member function 'objective_function::operator()' requested here 1277 | F(); // Run through user template (modifies reportvector) | ^ gllvm.cpp:310:16: note: remove extraneous parentheses around the comparison to silence this warning 310 | if((random(0)==0)){ | ~ ^ ~ gllvm.cpp:310:16: note: use '=' to turn this equality comparison into an assignment 310 | if((random(0)==0)){ | ^~ | = gllvm.cpp:310:16: warning: equality comparison with extraneous parentheses [-Wparentheses-equality] 310 | if((random(0)==0)){ | ~~~~~~~~~^~~ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/TMB/include/tmb_core.hpp:2031:34: note: in instantiation of member function 'objective_function::operator()' requested here 2031 | PROTECT( res = asSEXP( pf->operator()() ) ); | ^ gllvm.cpp:310:16: note: remove extraneous parentheses around the comparison to silence this warning 310 | if((random(0)==0)){ | ~ ^ ~ gllvm.cpp:310:16: note: use '=' to turn this equality comparison into an assignment 310 | if((random(0)==0)){ | ^~ | = gllvm.cpp:1815:23: warning: equality comparison with extraneous parentheses [-Wparentheses-equality] 1815 | if((y(i,j)==0)){ | ~~~~~~^~~ gllvm.cpp:1815:23: note: remove extraneous parentheses around the comparison to silence this warning 1815 | if((y(i,j)==0)){ | ~ ^ ~ gllvm.cpp:1815:23: note: use '=' to turn this equality comparison into an assignment 1815 | if((y(i,j)==0)){ | ^~ | = gllvm.cpp:1819:30: warning: equality comparison with extraneous parentheses [-Wparentheses-equality] 1819 | } else if((y(i,j)==1)){ | ~~~~~~^~~ gllvm.cpp:1819:30: note: remove extraneous parentheses around the comparison to silence this warning 1819 | } else if((y(i,j)==1)){ | ~ ^ ~ gllvm.cpp:1819:30: note: use '=' to turn this equality comparison into an assignment 1819 | } else if((y(i,j)==1)){ | ^~ | = 8 warnings generated. clang++-18 -std=gnu++17 -shared -L/home/hornik/tmp/R.check/r-devel-clang/Work/build/lib -Wl,-O1 -o gllvm.so gllvm.o -L/home/hornik/tmp/R.check/r-devel-clang/Work/build/lib -lR make[1]: Leaving directory '/tmp/RtmptX9ZLJ/R.INSTALLd9c47762617e4/gllvm/src' make[1]: Entering directory '/tmp/RtmptX9ZLJ/R.INSTALLd9c47762617e4/gllvm/src' make[1]: Leaving directory '/tmp/RtmptX9ZLJ/R.INSTALLd9c47762617e4/gllvm/src' installing to /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/00LOCK-gllvm/00new/gllvm/libs ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * creating tarball packaged installation of ‘gllvm’ as ‘gllvm_1.4.3_R_x86_64-pc-linux-gnu.tar.gz’ * DONE (gllvm)