* using log directory ‘/home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/clhs.Rcheck’ * using R Under development (unstable) (2024-04-27 r86487) * using platform: x86_64-pc-linux-gnu * R was compiled by Debian clang version 18.1.4 (1) Debian flang-new version 18.1.4 (1) * running under: Debian GNU/Linux trixie/sid * using session charset: UTF-8 * checking for file ‘clhs/DESCRIPTION’ ... OK * checking extension type ... Package * this is package ‘clhs’ version ‘0.9.0’ * package encoding: UTF-8 * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for executable files ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking serialization versions ... OK * checking whether package ‘clhs’ can be installed ... OK See 'https://www.r-project.org/nosvn/R.check/r-devel-linux-x86_64-debian-clang/clhs-00install.html' for details. * used C++ compiler: ‘Debian clang version 18.1.4 (1)’ * checking C++ specification ... NOTE Specified C++11: please drop specification unless essential * checking package directory ... OK * checking for future file timestamps ... OK * checking ‘build’ directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... NOTE Problems with news in ‘NEWS.md’: Cannot extract version info from the following section titles: clhs_0.7-2 clhs_0.7-0 clhs_0.6-0 clhs_0.5-7 clhs_0.5-6 clhs_0.5-3 clhs_0.5-2 clhs_0.5-1 clhs_0.5-0 clhs_0.4-3 clhs_0.4-2 clhs_0.4-1 clhs_0.4-0 clhs_0.3-2 clhs_0.3-1 clhs_0.3-0 clhs_0.2-1 clhs_0.2-0 clhs_0.1-0 * checking code files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... [14s/17s] OK * checking whether the package can be loaded with stated dependencies ... [14s/18s] OK * checking whether the package can be unloaded cleanly ... [14s/16s] OK * checking whether the namespace can be loaded with stated dependencies ... [13s/14s] OK * checking whether the namespace can be unloaded cleanly ... [14s/15s] OK * checking loading without being on the library search path ... [14s/18s] OK * checking use of S3 registration ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... [61s/79s] OK * checking Rd files ... [0s/1s] OK * checking Rd metadata ... OK * checking Rd line widths ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking line endings in C/C++/Fortran sources/headers ... OK * checking line endings in Makefiles ... OK * checking compilation flags in Makevars ... OK * checking for GNU extensions in Makefiles ... OK * checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK * checking use of PKG_*FLAGS in Makefiles ... OK * checking use of SHLIB_OPENMP_*FLAGS in Makefiles ... OK * checking pragmas in C/C++ headers and code ... OK * checking compilation flags used ... OK * checking compiled code ... OK * checking installed files from ‘inst/doc’ ... OK * checking files in ‘vignettes’ ... OK * checking examples ... [27s/30s] OK Examples with CPU (user + system) or elapsed time > 5s user system elapsed plot.cLHS_result 7.46 0.052 8.092 * checking for unstated dependencies in ‘tests’ ... OK * checking tests ... [68s/77s] OK Running ‘testthat.R’ [68s/76s] * checking for unstated dependencies in vignettes ... OK * checking package vignettes ... OK * checking re-building of vignette outputs ... [59s/74s] OK * checking PDF version of manual ... [5s/7s] OK * checking HTML version of manual ... [1s/1s] OK * checking for non-standard things in the check directory ... OK * DONE Status: 2 NOTEs