* installing to library ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages’ * installing *source* package ‘SANvi’ ... ** package ‘SANvi’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘Debian clang version 18.1.4 (1)’ make[1]: Entering directory '/tmp/RtmpthZfgq/R.INSTALL104e79547f7c30/SANvi/src' clang++-18 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c A_AUX.cpp -o A_AUX.o clang++-18 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c B_EXP_VALUES.cpp -o B_EXP_VALUES.o clang++-18 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c C_NORM_CONST.cpp -o C_NORM_CONST.o clang++-18 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c D_CAVI_UPDATES.cpp -o D_CAVI_UPDATES.o clang++-18 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c E_ELBO_COMPONENTS.cpp -o E_ELBO_COMPONENTS.o clang++-18 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c F_MAIN_CAM.cpp -o F_MAIN_CAM.o F_MAIN_CAM.cpp:159:10: warning: using integer absolute value function 'abs' when argument is of floating point type [-Wabsolute-value] 159 | if(abs(ELBO_val[ii]-ELBO_val[ii-1]) < epsilon ) { | ^ F_MAIN_CAM.cpp:159:10: note: use function 'std::abs' instead 159 | if(abs(ELBO_val[ii]-ELBO_val[ii-1]) < epsilon ) { | ^~~ | std::abs 1 warning generated. clang++-18 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c F_MAIN_CAM_Concentration.cpp -o F_MAIN_CAM_Concentration.o F_MAIN_CAM_Concentration.cpp:194:10: warning: using integer absolute value function 'abs' when argument is of floating point type [-Wabsolute-value] 194 | if(abs(ELBO_val[ii]-ELBO_val[ii-1]) < epsilon ) { | ^ F_MAIN_CAM_Concentration.cpp:194:10: note: use function 'std::abs' instead 194 | if(abs(ELBO_val[ii]-ELBO_val[ii-1]) < epsilon ) { | ^~~ | std::abs 1 warning generated. clang++-18 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c F_MAIN_fSAN.cpp -o F_MAIN_fSAN.o F_MAIN_fSAN.cpp:141:10: warning: using integer absolute value function 'abs' when argument is of floating point type [-Wabsolute-value] 141 | if(abs(ELBO_val[ii]-ELBO_val[ii-1]) < epsilon ) { | ^ F_MAIN_fSAN.cpp:141:10: note: use function 'std::abs' instead 141 | if(abs(ELBO_val[ii]-ELBO_val[ii-1]) < epsilon ) { | ^~~ | std::abs 1 warning generated. clang++-18 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c F_MAIN_fiSAN.cpp -o F_MAIN_fiSAN.o F_MAIN_fiSAN.cpp:143:10: warning: using integer absolute value function 'abs' when argument is of floating point type [-Wabsolute-value] 143 | if(abs(ELBO_val[ii]-ELBO_val[ii-1]) < epsilon ) { | ^ F_MAIN_fiSAN.cpp:143:10: note: use function 'std::abs' instead 143 | if(abs(ELBO_val[ii]-ELBO_val[ii-1]) < epsilon ) { | ^~~ | std::abs 1 warning generated. clang++-18 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c F_MAIN_fiSAN_Concentration.cpp -o F_MAIN_fiSAN_Concentration.o F_MAIN_fiSAN_Concentration.cpp:184:10: warning: using integer absolute value function 'abs' when argument is of floating point type [-Wabsolute-value] 184 | if(abs(ELBO_val[ii]-ELBO_val[ii-1]) < epsilon ) { | ^ F_MAIN_fiSAN_Concentration.cpp:184:10: note: use function 'std::abs' instead 184 | if(abs(ELBO_val[ii]-ELBO_val[ii-1]) < epsilon ) { | ^~~ | std::abs 1 warning generated. clang++-18 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c RcppExports.cpp -o RcppExports.o clang++-18 -std=gnu++17 -shared -L/home/hornik/tmp/R.check/r-devel-clang/Work/build/lib -Wl,-O1 -o SANvi.so A_AUX.o B_EXP_VALUES.o C_NORM_CONST.o D_CAVI_UPDATES.o E_ELBO_COMPONENTS.o F_MAIN_CAM.o F_MAIN_CAM_Concentration.o F_MAIN_fSAN.o F_MAIN_fiSAN.o F_MAIN_fiSAN_Concentration.o RcppExports.o -llapack -L/home/hornik/tmp/R.check/r-devel-clang/Work/build/lib -lRblas -L/usr/lib/llvm-18/lib -lFortran_main -lFortranRuntime -lFortranDecimal -lm -L/home/hornik/tmp/R.check/r-devel-clang/Work/build/lib -lR make[1]: Leaving directory '/tmp/RtmpthZfgq/R.INSTALL104e79547f7c30/SANvi/src' make[1]: Entering directory '/tmp/RtmpthZfgq/R.INSTALL104e79547f7c30/SANvi/src' make[1]: Leaving directory '/tmp/RtmpthZfgq/R.INSTALL104e79547f7c30/SANvi/src' installing to /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/00LOCK-SANvi/00new/SANvi/libs ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (SANvi)