* installing to library ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages’
* installing *source* package ‘NAIR’ ...
** package ‘NAIR’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C++ compiler: ‘Debian clang version 18.1.4 (1)’
make[1]: Entering directory '/tmp/Rtmpcr2Atn/R.INSTALLe00316c3cdd4b/NAIR/src'
clang++-18 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -DARMA_64BIT_WORD=1 -fpic -g -O3 -Wall -pedantic -c RcppExports.cpp -o RcppExports.o
clang++-18 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -DARMA_64BIT_WORD=1 -fpic -g -O3 -Wall -pedantic -c dropDegreeZero.cpp -o dropDegreeZero.o
clang++-18 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -DARMA_64BIT_WORD=1 -fpic -g -O3 -Wall -pedantic -c hamAdjacencyMatSparse.cpp -o hamAdjacencyMatSparse.o
In file included from hamAdjacencyMatSparse.cpp:20:
./dropDegreeZero.h:4:9: warning: 'ARMA_64BIT_WORD' macro redefined [-Wmacro-redefined]
4 | #define ARMA_64BIT_WORD 1
| ^
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo_bits/compiler_setup.hpp:88:11: note: previous definition is here
88 | #define ARMA_64BIT_WORD
| ^
1 warning generated.
clang++-18 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -DARMA_64BIT_WORD=1 -fpic -g -O3 -Wall -pedantic -c hamDistBounded.cpp -o hamDistBounded.o
clang++-18 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -DARMA_64BIT_WORD=1 -fpic -g -O3 -Wall -pedantic -c levAdjacencyMatSparse.cpp -o levAdjacencyMatSparse.o
In file included from levAdjacencyMatSparse.cpp:20:
./dropDegreeZero.h:4:9: warning: 'ARMA_64BIT_WORD' macro redefined [-Wmacro-redefined]
4 | #define ARMA_64BIT_WORD 1
| ^
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo_bits/compiler_setup.hpp:88:11: note: previous definition is here
88 | #define ARMA_64BIT_WORD
| ^
1 warning generated.
clang++-18 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -DARMA_64BIT_WORD=1 -fpic -g -O3 -Wall -pedantic -c levDistBounded.cpp -o levDistBounded.o
clang++-18 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -DARMA_64BIT_WORD=1 -fpic -g -O3 -Wall -pedantic -c patternAdjacencyMatSparse.cpp -o patternAdjacencyMatSparse.o
clang++-18 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -DARMA_64BIT_WORD=1 -fpic -g -O3 -Wall -pedantic -c sortAdjacencyMatSparse.cpp -o sortAdjacencyMatSparse.o
In file included from sortAdjacencyMatSparse.cpp:24:
./dropDegreeZero.h:4:9: warning: 'ARMA_64BIT_WORD' macro redefined [-Wmacro-redefined]
4 | #define ARMA_64BIT_WORD 1
| ^
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo_bits/compiler_setup.hpp:88:11: note: previous definition is here
88 | #define ARMA_64BIT_WORD
| ^
1 warning generated.
clang++-18 -std=gnu++17 -shared -L/home/hornik/tmp/R.check/r-devel-clang/Work/build/lib -Wl,-O1 -o NAIR.so RcppExports.o dropDegreeZero.o hamAdjacencyMatSparse.o hamDistBounded.o levAdjacencyMatSparse.o levDistBounded.o patternAdjacencyMatSparse.o sortAdjacencyMatSparse.o -llapack -L/home/hornik/tmp/R.check/r-devel-clang/Work/build/lib -lRblas -L/usr/lib/llvm-18/lib -lFortran_main -lFortranRuntime -lFortranDecimal -lm -L/home/hornik/tmp/R.check/r-devel-clang/Work/build/lib -lR
make[1]: Leaving directory '/tmp/Rtmpcr2Atn/R.INSTALLe00316c3cdd4b/NAIR/src'
make[1]: Entering directory '/tmp/Rtmpcr2Atn/R.INSTALLe00316c3cdd4b/NAIR/src'
make[1]: Leaving directory '/tmp/Rtmpcr2Atn/R.INSTALLe00316c3cdd4b/NAIR/src'
installing to /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/00LOCK-NAIR/00new/NAIR/libs
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
*** copying figures
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* creating tarball
packaged installation of ‘NAIR’ as ‘NAIR_1.0.4_R_x86_64-pc-linux-gnu.tar.gz’
* DONE (NAIR)