• using R Under development (unstable) (2017-08-15 r73096)
• using platform: x86_64-pc-linux-gnu (64-bit)
• using session charset: UTF-8
• checking for file ‘LIHNPSD/DESCRIPTION’ ... OK
• checking extension type ... Package
• this is package ‘LIHNPSD’ version ‘0.2.1’
• checking package namespace information ... OK
• checking package dependencies ... NOTE
  Depends: includes the non-default packages:
    ‘sn’ ‘moments’ ‘BB’ ‘Bolstad2’ ‘optimx’ ‘Rmpfr’
  Adding so many packages to the search path is excessive and importing
  selectively is preferable.
• checking if this is a source package ... OK
• checking if there is a namespace ... OK
• checking for executable files ... OK
• checking for hidden files and directories ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking whether package ‘LIHNPSD’ can be installed ... OK
• checking package directory ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... NOTE
  Non-standard files/directories found at top level:
    ‘LIHNPSD-manual.pdf’ ‘PSD-Paper.pdf’ ‘Rplots.pdf’
• checking for left-over files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking R files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... OK
• checking whether the package can be loaded with stated dependencies ... OK
• checking whether the package can be unloaded cleanly ... OK
• checking whether the namespace can be loaded with stated dependencies ... OK
• checking whether the namespace can be unloaded cleanly ... OK
• checking loading without being on the library search path ... OK
• checking use of S3 registration ... OK
• checking dependencies in R code ... NOTE
  Packages in Depends field not imported from:
    ‘BB’ ‘Bolstad2’ ‘Rmpfr’ ‘moments’ ‘optimx’ ‘sn’
    These packages need to be imported from (in the NAMESPACE file)
    for when this namespace is loaded but not attached.
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... [7s/7s] NOTE
  .N: no visible global function definition for ‘mpfr’
  LIHNPSD_plot_std4gr: no visible global function definition for
    ‘postscript’
  LIHNPSD_plot_std4gr: no visible global function definition for ‘par’
  LIHNPSD_plot_std4gr: no visible global function definition for
    ‘dev.off’
  LIHNPSD_plotcdf: no visible global function definition for ‘par’
  LIHNPSD_plotcdf: no visible global function definition for ‘plot’
  LIHNPSD_plotcdf: no visible global function definition for ‘lines’
  LIHNPSD_plotcdf: no visible global function definition for ‘text’
  LIHNPSD_plotlogpdf: no visible global function definition for ‘par’
  LIHNPSD_plotlogpdf: no visible global function definition for ‘plot’
  LIHNPSD_plotlogpdf: no visible global function definition for ‘lines’
  LIHNPSD_plotlogpdf: no visible global function definition for ‘text’
  LIHNPSD_plotpdf: no visible global function definition for ‘par’
  LIHNPSD_plotpdf: no visible global function definition for ‘plot’
  LIHNPSD_plotpdf: no visible global function definition for ‘lines’
  LIHNPSD_plotpdf: no visible global function definition for ‘segments’
  LIHNPSD_plotpdf: no visible global function definition for ‘text’
  LIHNPSD_plotpdf: no visible global function definition for ‘legend’
  LIHNPSD_plotqq: no visible global function definition for ‘par’
  LIHNPSD_plotqq: no visible global function definition for ‘plot’
  LIHNPSD_plotqq: no visible global function definition for ‘abline’
  LIHNPSD_plotqq: no visible global function definition for ‘lines’
  LIHNPSD_plotqq: no visible global function definition for ‘legend’
  LIHNPSD_plotqq: no visible global function definition for ‘text’
  LIHNPSD_prepare_data: no visible global function definition for ‘var’
  LIHNPSD_prepare_data: no visible global function definition for
    ‘skewness’
  LIHNPSD_prepare_data: no visible global function definition for
    ‘kurtosis’
  LIHNPSD_prepare_data: no visible global function definition for ‘hist’
  LIHNPSD_standardfit_fn: no visible global function definition for ‘par’
  LIHNPSD_standardfit_fn: no visible global function definition for
    ‘plot’
  LIHNPSD_standardfit_fn: no visible global function definition for
    ‘lines’
  LIHNPSD_standardfit_fn: no visible global function definition for
    ‘text’
  LIHNPSD_standardfit_fn: no visible global function definition for
    ‘abline’
  LIHNPSD_standardfit_test: no visible global function definition for
    ‘var’
  LIHNPSD_standardfit_test: no visible global function definition for
    ‘skewness’
  LIHNPSD_standardfit_test: no visible global function definition for
    ‘kurtosis’
  LihnBetaPoly: no visible global function definition for ‘Const’
  LihnBetaPoly: no visible global function definition for ‘getPrec’
  LihnTildeFunction: no visible global function definition for ‘Const’
  LihnTildeFunction: no visible global function definition for ‘getPrec’
  prepare.LIHNPSD : D: no visible global function definition for ‘mpfr’
  prepare.LIHNPSD: no visible global function definition for ‘Const’
  psdunittest.LIHNPSD: no visible global function definition for
    ‘sintegral’
  rawcdf.LIHNPSD : cdf: no visible global function definition for ‘erf’
  rawcdf.LIHNPSD : cdf: no visible global function definition for
    ‘T.Owen’
  rawsn.LIHNPSD: no visible global function definition for ‘erf’
  standardfit.LIHNPSD: no visible global function definition for ‘var’
  standardfit.LIHNPSD: no visible global function definition for
    ‘skewness’
  standardfit.LIHNPSD: no visible global function definition for
    ‘kurtosis’
  standardfit.LIHNPSD: no visible global function definition for ‘optimx’
  tailindex_plot.LIHNPSD: no visible global function definition for
    ‘plot’
  tailindex_plot.LIHNPSD: no visible global function definition for
    ‘abline’
  Undefined global functions or variables:
    Const T.Owen abline dev.off erf getPrec hist kurtosis legend lines
    mpfr optimx par plot postscript segments sintegral skewness text var
  Consider adding
    importFrom("grDevices", "dev.off", "postscript")
    importFrom("graphics", "abline", "hist", "legend", "lines", "par",
               "plot", "segments", "text")
    importFrom("stats", "var")
  to your NAMESPACE file.
• checking Rd files ... OK
• checking Rd metadata ... OK
• checking Rd line widths ... NOTE
  Rd file 'LIHNPSD-package.Rd':
    \examples lines wider than 100 characters:
         dist <- list( sigma= 0.004625, alpha= 0.292645, gamma= 0.482744, beta= -0.154049, location= 0.002968 )
  
  Rd file 'LIHNPSD_standardfit_fn.Rd':
    \usage lines wider than 90 characters:
       LIHNPSD_standardfit_fn(psd, data_stats, hist, plotqq = 1, weights = list(), merge_tails = c(0, 0), debug = 0)
  
  Rd file 'prepare.Rd':
    \examples lines wider than 100 characters:
         dist <- list( sigma= 0.004625, alpha= 0.292645, gamma= 0.482744, beta= -0.154049, location= 0.002968 )
  
  Rd file 'rawmean.Rd':
    \examples lines wider than 100 characters:
         dist <- list( sigma= 0.004625, alpha= 0.292645, gamma= 0.482744, beta= -0.154049, location= 0.002968 )
  
  These lines will be truncated in the PDF manual.
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking contents of ‘data’ directory ... OK
• checking data for non-ASCII characters ... OK
• checking data for ASCII and uncompressed saves ... OK
• checking examples ... [6s/6s] OK
  Examples with CPU or elapsed time > 5s
                   user system elapsed
  LIHNPSD-package 5.276 0.068 5.341
• checking PDF version of manual ... OK
• DONE

Status: 5 NOTEs