• using R Under development (unstable) (2012-02-23 r58468)
  • using platform: i686-pc-linux-gnu (32-bit)
  • using session charset: UTF-8
  • checking for file ‘spacetime/DESCRIPTION’ ... OK
  • this is package ‘spacetime’ version ‘0.5-7’
  • checking package namespace information ... OK
  • checking package dependencies ... OK
  • checking if this is a source package ... OK
  • checking if there is a namespace ... OK
  • checking for executable files ... OK
  • checking whether package ‘spacetime’ can be installed ... OK
  • checking installed package size ... OK
  • checking package directory ... OK
  • checking for portable file names ... OK
  • checking for sufficient/correct file permissions ... OK
  • checking DESCRIPTION meta-information ... OK
  • checking top-level files ... OK
  • checking index information ... OK
  • checking package subdirectories ... OK
  • checking R files for non-ASCII characters ... OK
  • checking R files for syntax errors ... OK
  • checking whether the package can be loaded ... OK
  • checking whether the package can be loaded with stated dependencies ... OK
  • checking whether the package can be unloaded cleanly ... OK
  • checking whether the namespace can be loaded with stated dependencies ... OK
  • checking whether the namespace can be unloaded cleanly ... OK
  • checking for unstated dependencies in R code ... OK
  • checking S3 generic/method consistency ... OK
  • checking replacement functions ... OK
  • checking foreign function calls ... OK
  • checking R code for possible problems ... OK
  • checking Rd files ... OK
  • checking Rd metadata ... OK
  • checking Rd cross-references ... OK
  • checking for missing documentation entries ... OK
  • checking for code/documentation mismatches ... OK
  • checking Rd \usage sections ... OK
  • checking Rd contents ... OK
  • checking for unstated dependencies in examples ... OK
  • checking contents of ‘data’ directory ... OK
  • checking data for non-ASCII characters ... OK
  • checking data for ASCII and uncompressed saves ... OK
  • checking sizes of PDF files under ‘inst/doc’ ... OK
  • checking installed files from ‘inst/doc’ ... NOTE
    The following files are already in R: ‘jss.bst’, ‘jss.cls’
    Please remove them from your package.
    The following files look like leftovers/mistakes:
    ‘spacetime.bbl’, ‘spacetime.blg’
    Please remove them from your package.
  • checking examples ... [8s/8s] OK
  • checking for unstated dependencies in tests ... OK
  • checking tests ... [13s/13s] OK
    Running ‘basic.R’ [1s/1s]
    Comparing ‘basic.Rout’ to ‘basic.Rout.save’ ...13c13
    < as.Date, as.Date.numeric
    ---
    > as.Date
    Running ‘over.R’ [2s/2s]
    Comparing ‘over.Rout’ to ‘over.Rout.save’ ...9c9
    < as.Date, as.Date.numeric
    ---
    > as.Date
    Running ‘stconstruct.R’ [2s/2s]
    Comparing ‘stconstruct.Rout’ to ‘stconstruct.Rout.save’ ...9c9
    < as.Date, as.Date.numeric
    ---
    > as.Date
    23,29d22
    <
    < Attaching package: 'bdsmatrix'
    <
    < The following object(s) are masked from 'package:base':
    <
    < backsolve
    <
    Running ‘traj.R’ [4s/4s]
    Comparing ‘traj.Rout’ to ‘traj.Rout.save’ ...12c12
    < as.Date, as.Date.numeric
    ---
    > as.Date
    16,17c16,17
    < This is mgcv 1.7-13. For overview type 'help("mgcv-package")'.
    < deldir 0.0-16
    ---
    > This is mgcv 1.7-6. For overview type 'help("mgcv-package")'.
    > deldir 0.0-15
    22c22
    < spatstat 1.25-3
    ---
    > spatstat 1.23-4
    36a37
    > [1] "STIDFtrip"
    105a107
    > [1] "ltraj"
    106a109
    > [1] "STIDFltraj"
    Running ‘wind.R’ [3s/3s]
    Comparing ‘wind.Rout’ to ‘wind.Rout.save’ ...105,106c105,106
    < Loaded GDAL runtime: GDAL 1.7.3, released 2010/11/10
    < Path to GDAL shared files: /usr/share/gdal/1.7
    ---
    > Loaded GDAL runtime: GDAL 1.8.0, released 2011/01/12
    > Path to GDAL shared files: /usr/share/gdal/1.8
  • checking for unstated dependencies in vignettes ... OK
  • checking package vignettes in ‘inst/doc’ ... OK
  • checking running R code from vignettes ... [34s/34s] OK
  • checking re-building of vignette PDFs ... [37s/38s] OK
  • checking PDF version of manual ... OK
    NOTE: There was 1 note.
    See
    ‘/home/hornik/tmp/R.check/r-devel/Work/PKGS/spacetime.Rcheck/00check.log’
    for details.