- using R Under development (unstable) (2012-02-06 r58287)
- using platform: i686-pc-linux-gnu (32-bit)
- using session charset: UTF-8
- checking for file ‘robustbase/DESCRIPTION’ ... OK
- this is package ‘robustbase’ version ‘0.8-0’
- checking package namespace information ... OK
- checking package dependencies ... OK
- checking if this is a source package ... OK
- checking if there is a namespace ... OK
- checking for executable files ... OK
- checking whether package ‘robustbase’ can be installed ... OK
- checking installed package size ... OK
- checking package directory ... OK
- checking for portable file names ... OK
- checking for sufficient/correct file permissions ... OK
- checking DESCRIPTION meta-information ... OK
- checking top-level files ... OK
- checking index information ... OK
- checking package subdirectories ... OK
- checking R files for non-ASCII characters ... OK
- checking R files for syntax errors ... OK
- checking whether the package can be loaded ... OK
- checking whether the package can be loaded with stated dependencies ... OK
- checking whether the package can be unloaded cleanly ... OK
- checking whether the namespace can be loaded with stated dependencies ... OK
- checking whether the namespace can be unloaded cleanly ... OK
- checking for unstated dependencies in R code ... OK
- checking S3 generic/method consistency ... OK
- checking replacement functions ... OK
- checking foreign function calls ... OK
- checking R code for possible problems ... NOTE
.vcov.w: no visible binding for global variable ‘r’
covMcd: warning in determinant(mcd, log = TRUE): partial argument match
of 'log' to 'logarithm'
covMcd: warning in determinant(ans$cov, log = TRUE): partial argument
match of 'log' to 'logarithm'
glmrob: no visible global function definition for ‘glmrobCubif’
glmrobMqle: no visible binding for global variable ‘residP’
glmrobMqle: no visible binding for global variable ‘residPS’
glmrobMqle: no visible binding for global variable ‘sV’
glmrobMqle: no visible binding for global variable ‘dmu.deta’
lmrob.ggw.ac: no visible binding for global variable ‘r’
lmrob.ggw.bp: no visible binding for global variable ‘r’
lmrob.kappa : fun.min: no visible global function definition for ‘psi’
lmrob.kappa : fun.min: no visible binding for global variable ‘r’
lmrob.kappa : fun.min: no visible global function definition for ‘wgt’
lmrob.tau.fast.coefs: no visible binding for global variable ‘r’
ltsReg.default: warning in determinant(mcd$cov, log = TRUE): partial
argument match of 'log' to 'logarithm'
print.summary.glmrob: warning in symnum(correl, abbr.col = NULL):
partial argument match of 'abbr.col' to 'abbr.colnames'
- checking Rd files ... OK
- checking Rd metadata ... OK
- checking Rd cross-references ... OK
- checking for missing documentation entries ... OK
- checking for code/documentation mismatches ... OK
- checking Rd \usage sections ... OK
- checking Rd contents ... OK
- checking for unstated dependencies in examples ... OK
- checking contents of ‘data’ directory ... OK
- checking data for non-ASCII characters ... OK
- checking data for ASCII and uncompressed saves ... OK
- checking line endings in C/C++/Fortran sources/headers ... OK
- checking line endings in Makefiles ... OK
- checking for portable compilation flags in Makevars ... OK
- checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
- checking compiled code ... OK
- checking sizes of PDF files under ‘inst/doc’ ... OK
- checking installed files from ‘inst/doc’ ... NOTE
The following files look like leftovers/mistakes:
‘lmrob_simulation.toc’
Please remove them from your package.
The following files should probably not be installed:
‘Makefile’
Consider the use of a .Rinstignore file: see ‘Writing R Extensions’,
or move the vignette sources from ‘inst/doc’ to ‘vignettes’.
- checking examples ... [8s/8s] OK
- checking for unstated dependencies in tests ... WARNING
‘data(package=)’ call not declared from: ‘cluster’
- checking tests ... ERROR
Running the tests in ‘tests/OGK-ex.R’ failed.
Last 13 lines of output:
Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.
> library(robustbase)
>
> ## minimal testing only
> data(ruspini, package = "cluster")
Error in find.package(package, lib.loc, verbose = verbose) :
there is no package called 'cluster'
Calls: data -> find.package
Execution halted