- using R Under development (unstable) (2012-02-23 r58468)
- using platform: i686-pc-linux-gnu (32-bit)
- using session charset: UTF-8
- checking for file ‘mvProbit/DESCRIPTION’ ... OK
- this is package ‘mvProbit’ version ‘0.1-0’
- checking package namespace information ... OK
- checking package dependencies ... OK
- checking if this is a source package ... OK
- checking if there is a namespace ... OK
- checking for executable files ... OK
- checking whether package ‘mvProbit’ can be installed ... OK
- checking installed package size ... OK
- checking package directory ... OK
- checking for portable file names ... OK
- checking for sufficient/correct file permissions ... OK
- checking DESCRIPTION meta-information ... OK
- checking top-level files ... OK
- checking index information ... OK
- checking package subdirectories ... OK
- checking R files for non-ASCII characters ... OK
- checking R files for syntax errors ... OK
- checking whether the package can be loaded ... OK
- checking whether the package can be loaded with stated dependencies ... OK
- checking whether the package can be unloaded cleanly ... OK
- checking whether the namespace can be loaded with stated dependencies ... OK
- checking whether the namespace can be unloaded cleanly ... OK
- checking for unstated dependencies in R code ... OK
- checking S3 generic/method consistency ... OK
- checking replacement functions ... OK
- checking foreign function calls ... OK
- checking R code for possible problems ... OK
- checking Rd files ... OK
- checking Rd metadata ... OK
- checking Rd cross-references ... OK
- checking for missing documentation entries ... OK
- checking for code/documentation mismatches ... OK
- checking Rd \usage sections ... OK
- checking Rd contents ... OK
- checking for unstated dependencies in examples ... OK
- checking examples ... [10s/10s] OK
- checking for unstated dependencies in tests ... OK
- checking tests ... [269s/270s] OK
Running ‘mvProbitEst.R’ [58s/58s]
Comparing ‘mvProbitEst.Rout’ to ‘mvProbitEst.Rout.save’ ...440,441c440,441
< [3] "Component 3: Mean relative difference: 0.0001800705"
< [4] "Component 4: Mean relative difference: 0.0001779413"
---
> [3] "Component 3: Mean relative difference: 0.0001800699"
> [4] "Component 4: Mean relative difference: 0.0001779414"
499c499
< [5] "Component 12: Mean relative difference: 0.00685237"
---
> [5] "Component 12: Mean relative difference: 0.006852369"
506c506
< [5] "Component 12: Mean relative difference: 0.006838736"
---
> [5] "Component 12: Mean relative difference: 0.006838735"
Running ‘mvProbitTest.R’ [68s/68s]
Comparing ‘mvProbitTest.Rout’ to ‘mvProbitTest.Rout.save’ ...1590,1591c1590,1591
< 1 0.176546731 -0.35173837 0.2230884 -0.1468532996 -0.32870549 0.6038590
< 2 0.470508468 -0.39074154 0.2416959 -0.4008818186 -0.40494388 0.4968085
---
> 1 0.176546731 -0.35173837 0.2230884 -0.1468532997 -0.32870549 0.6038590
> 2 0.470508468 -0.39074154 0.2416959 -0.4008818185 -0.40494388 0.4968085
1594c1594
< 5 0.329930691 -0.50525720 0.2791793 -0.2238869513 -0.56754997 0.4882992
---
> 5 0.329930691 -0.50525720 0.2791793 -0.2238869512 -0.56754997 0.4882992
1596,1599c1596,1599
< 7 0.036014555 -0.30982678 0.2977379 -0.0217517285 -0.39933488 0.3574964
< 8 0.147297394 -0.38616972 0.2839504 -0.0911171914 -0.46687210 0.4072593
< 9 0.361303561 -0.07095789 0.1415239 -0.3929209852 -0.06636947 0.3342959
< 10 0.001077011 -0.14918942 0.1852891 -0.0006898552 -0.19920415 0.1993821
---
> 7 0.036014555 -0.30982678 0.2977379 -0.0217517288 -0.39933488 0.3574964
> 8 0.147297395 -0.38616972 0.2839504 -0.0911171908 -0.46687210 0.4072593
> 9 0.361303561 -0.07095789 0.1415239 -0.3929209851 -0.06636947 0.3342959
> 10 0.001077011 -0.14918942 0.1852891 -0.0006898554 -0.19920415 0.1993821
1607,1612c1607,1612
< [7] "Component 7: Mean relative difference: 0.00021016"
< [8] "Component 8: Mean relative difference: 0.000130058"
< [9] "Component 9: Mean relative difference: 0.0002044691"
< [10] "Component 10: Mean relative difference: 0.0001675277"
< [11] "Component 11: Mean relative difference: 0.0001336311"
< [12] "Component 12: Mean relative difference: 0.0001409385"
---
> [7] "Component 7: Mean relative difference: 0.0002101602"
> [8] "Component 8: Mean relative difference: 0.0001300577"
> [9] "Component 9: Mean relative difference: 0.0002044689"
> [10] "Component 10: Mean relative difference: 0.0001675276"
> [11] "Component 11: Mean relative difference: 0.000133631"
> [12] "Component 12: Mean relative difference: 0.0001409384"
2949,2950c2949,2950
< 6 0.077898816 -0.07584486 0.06505061 -0.052733734 -0.0983536 0.08502351
< 7 0.086045010 -0.30982678 0.25307025 -0.065460223 -0.3993349 0.33273176
---
> 6 0.077898816 -0.07584485 0.06505061 -0.052733734 -0.0983536 0.08502351
> 7 0.086045011 -0.30982678 0.25307025 -0.065460223 -0.3993349 0.33273176
2953c2953
< 10 0.005925195 -0.14918942 0.14818742 -0.004533173 -0.1992042 0.16558531
---
> 10 0.005925195 -0.14918942 0.14818743 -0.004533173 -0.1992042 0.16558531
2961,2965c2961,2965
< [7] "Component 7: Mean relative difference: 0.0001634687"
< [8] "Component 8: Mean relative difference: 0.0001659604"
< [9] "Component 9: Mean relative difference: 0.0002713413"
< [10] "Component 10: Mean relative difference: 0.0001883159"
< [11] "Component 11: Mean relative difference: 9.769846e-05"
---
> [7] "Component 7: Mean relative difference: 0.0001634685"
> [8] "Component 8: Mean relative difference: 0.0001659605"
> [9] "Component 9: Mean relative difference: 0.0002713412"
> [10] "Component 10: Mean relative difference: 0.0001883161"
> [11] "Component 11: Mean relative difference: 9.769861e-05"
3019c3019
< [12] "Component 12: Mean relative difference: 0.007245038"
---
> [12] "Component 12: Mean relative difference: 0.007245039"
Running ‘mvProbitTest5.R’ [142s/143s]
Comparing ‘mvProbitTest5.Rout’ to ‘mvProbitTest5.Rout.save’ ... OK
Running ‘pmvnormWrapTest.R’ [0s/0s]
Comparing ‘pmvnormWrapTest.Rout’ to ‘pmvnormWrapTest.Rout.save’ ... OK
- checking PDF version of manual ... OK