• using R Under development (unstable) (2012-02-06 r58287)
• using platform: i686-pc-linux-gnu (32-bit)
• using session charset: UTF-8
• checking for file ‘marginTree/DESCRIPTION’ ... OK
• this is package ‘marginTree’ version ‘1.01’
• checking package namespace information ... OK
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking if there is a namespace ... OK
• checking for executable files ... OK
• checking whether package ‘marginTree’ can be installed ... OK
• checking installed package size ... OK
• checking package directory ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking R files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... OK
• checking whether the package can be loaded with stated dependencies ... OK
• checking whether the package can be unloaded cleanly ... OK
• checking whether the namespace can be loaded with stated dependencies ... OK
• checking whether the namespace can be unloaded cleanly ... OK
• checking for unstated dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... NOTE
  marginTree.plotcv: warning in axis(3, at = cv.obj$threshold, lab =
  paste(cv.obj$size), srt = 90, adj = 0): partial argument match of
  'lab' to 'labels'
  marginTree.predict: no visible binding for '<<-' assignment to ‘nbetas’
  marginTree.predict: no visible binding for global variable ‘a’
  mypredict: no visible binding for '<<-' assignment to ‘nbetas’
  mypredict: no visible binding for global variable ‘nbetas’
• checking Rd files ... NOTE
  prepare_Rd: marginTree.plclust.Rd:23-24: Dropping empty section \value
  prepare_Rd: marginTree.plotcv.Rd:21-22: Dropping empty section \value
• checking Rd metadata ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... NOTE
  S3 methods shown with full name in documentation object 'marginTree-internal':
  ‘print.marginTree’ ‘print.marginTreecv’ ‘print.marginTreegetnonzero’
  ‘summary.marginTreegetnonzero’
  
  The \usage entries for S3 methods should use the \method markup and not
  their full name.
  See the chapter ‘Writing R documentation files’ in the ‘Writing R
  Extensions’ manual.
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking examples ... [18s/18s] OK
• checking PDF version of manual ... OK
  NOTE: There were 3 notes.
  See
  ‘/home/hornik/tmp/R.check/r-devel/Work/PKGS/marginTree.Rcheck/00check.log’
  for details.