• using R Under development (unstable) (2012-02-23 r58468)
• using platform: i686-pc-linux-gnu (32-bit)
• using session charset: UTF-8
• checking for file ‘fanovaGraph/DESCRIPTION’ ... OK
• checking extension type ... Package
• this is package ‘fanovaGraph’ version ‘1.0’
• checking package namespace information ... OK
• checking package dependencies ... NOTE
  Package suggested but not available for checking: ‘manipulate’
• checking if this is a source package ... OK
• checking if there is a namespace ... OK
• checking for executable files ... OK
• checking whether package ‘fanovaGraph’ can be installed ... OK
• checking installed package size ... OK
• checking package directory ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking R files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... OK
• checking whether the package can be loaded with stated dependencies ... OK
• checking whether the package can be unloaded cleanly ... OK
• checking whether the namespace can be loaded with stated dependencies ... OK
• checking whether the namespace can be unloaded cleanly ... OK
• checking for unstated dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... NOTE
  Found the following possibly unsafe calls:
  File 'R/modify.igraph.R':
  found unlockBinding(".igraph.shapes", asNamespace("igraph"))
  found unlockBinding("i.default.values", asNamespace("igraph"))
  estimateGraphFix: warning in matrix(, nr = nfast99, nc = 2): partial
  argument match of 'nr' to 'nrow'
  estimateGraphFix: warning in matrix(, nr = nfast99, nc = 2): partial
  argument match of 'nc' to 'ncol'
  estimateGraphSob: warning in matrix(runif(Nsobol * d), nc = d): partial
  argument match of 'nc' to 'ncol'
  estimateGraphSob: warning in matrix(nr = Nsobol, nc = d): partial
  argument match of 'nr' to 'nrow'
  estimateGraphSob: warning in matrix(nr = Nsobol, nc = d): partial
  argument match of 'nc' to 'ncol'
  estimateGraphSob: warning in matrix(runif(Nsobol * 2), nc = 2): partial
  argument match of 'nc' to 'ncol'
  estimateGraphSob: warning in matrix(runif(Nsobol), nc = 1): partial
  argument match of 'nc' to 'ncol'
  plotDeltaSteps: warning in axis(1, at = 1:length(delta), label =
  round(delta, 4), las = 2, outer = TRUE): partial argument match of
  'label' to 'labels'
  plotManipulate: no visible global function definition for ‘manipulate’
  plotManipulate: no visible binding for global variable ‘delta’
  plotManipulate: no visible global function definition for ‘slider’
• checking Rd files ... OK
• checking Rd metadata ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking examples ... [15s/15s] OK
• checking PDF version of manual ... OK
  NOTE: There were 2 notes.
  See
  ‘/home/hornik/tmp/R.check/r-devel/Work/PKGS/fanovaGraph.Rcheck/00check.log’
  for details.