• using R Under development (unstable) (2012-02-06 r58287)
• using platform: i686-pc-linux-gnu (32-bit)
• using session charset: UTF-8
• checking for file ‘extRemes/DESCRIPTION’ ... OK
• this is package ‘extRemes’ version ‘1.64’
• checking package namespace information ... OK
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking if there is a namespace ... OK
• checking for executable files ... OK
• checking whether package ‘extRemes’ can be installed ... OK
• checking installed package size ... OK
• checking package directory ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking R files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... OK
• checking whether the package can be loaded with stated dependencies ... OK
• checking whether the package can be unloaded cleanly ... OK
• checking whether the namespace can be loaded with stated dependencies ... OK
• checking whether the namespace can be unloaded cleanly ... OK
• checking for unstated dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... NOTE
  DataSummaryGUI: warning in ls(all = TRUE, name = ".GlobalEnv"): partial
  argument match of 'all' to 'all.names'
  affine.gui : refresh: no visible binding for global variable
  ‘extRemesData’
  affine.gui : affine.trans: no visible binding for global variable
  ‘cnames’
  affine.gui : affine.trans: no visible binding for global variable
  ‘cols.selected’
  affine.gui: warning in ls(all = TRUE, name = ".GlobalEnv"): partial
  argument match of 'all' to 'all.names'
  affine.gui: no visible binding for global variable ‘extRemesData’
  affine.gui: no visible binding for global variable ‘dd’
  decluster.gui : refresh: no visible binding for global variable
  ‘extRemesData’
  decluster.gui : submit: no visible binding for global variable ‘cnames’
  decluster.gui : submit: no visible binding for global variable
  ‘tmp.data’
  decluster.gui : submit: no visible binding for global variable
  ‘cluster.by.val’
  decluster.gui : submit: no visible binding for global variable
  ‘cols.selected’
  decluster.gui : submit: no visible binding for global variable ‘out’
  decluster.gui: warning in ls(all = TRUE, name = ".GlobalEnv"): partial
  argument match of 'all' to 'all.names'
  decluster.gui: no visible binding for global variable ‘extRemesData’
  decluster.gui: no visible binding for global variable ‘dd’
  extremalind.gui : submit: no visible binding for global variable ‘look’
  extremalind.gui: warning in ls(all = TRUE, name = ".GlobalEnv"):
  partial argument match of 'all' to 'all.names'
  extremes.gui : ev.dataexists: warning in ls(all = TRUE, pos =
  ".GlobalEnv"): partial argument match of 'all' to 'all.names'
  fitdiag.gui: warning in ls(all = TRUE, name = ".GlobalEnv"): partial
  argument match of 'all' to 'all.names'
  fitsummary.gui: warning in ls(all = TRUE, name = ".GlobalEnv"): partial
  argument match of 'all' to 'all.names'
  gev.rlci: no visible global function definition for ‘describe’
  gev.rlci : gev.plik: no visible global function definition for
  ‘gum.lik’
  gevf.gui : refresh: no visible binding for global variable
  ‘extRemesData’
  gevf.gui : redolists: no visible binding for global variable
  ‘extRemesData’
  gevf.gui : submit: no visible binding for global variable
  ‘cov.selected’
  gevf.gui : submit: no visible binding for global variable ‘dat.cols’
  gevf.gui : submit: no visible binding for global variable ‘mu.cov.cols’
  gevf.gui : submit: no visible binding for global variable
  ‘sig.cov.cols’
  gevf.gui : submit: no visible binding for global variable
  ‘gam.cov.cols’
  gevf.gui : submit: no visible binding for global variable ‘mu’
  gevf.gui : submit: no visible binding for global variable ‘sigma’
  gevf.gui : submit: no visible binding for global variable ‘xi’
  gevf.gui : submit: no visible binding for global variable ‘Dev’
  gevf.gui : submit: no visible binding for global variable ‘fit.obj’
  gevf.gui : submit: no visible binding for global variable ‘cov.names’
  gevf.gui: warning in ls(all = TRUE, name = ".GlobalEnv"): partial
  argument match of 'all' to 'all.names'
  gevf.gui: no visible binding for global variable ‘extRemesData’
  gevparamCI.gui : submit: no visible binding for global variable ‘fit’
  gevparamCI.gui : submit: no visible binding for global variable
  ‘est.rl’
  gevparamCI.gui : submit: no visible binding for global variable ‘ci’
  gevparamCI.gui: warning in ls(all = TRUE, name = ".GlobalEnv"): partial
  argument match of 'all' to 'all.names'
  gpd.parameterCI: warning in matrix(c((la * (1 - la))/z$n, 0, 0, 0,
  mat[1, 1], mat[1, 2], 0, mat[2, 1], mat[2, 2]), nc = 3): partial
  argument match of 'nc' to 'ncol'
  gpd.rl2: warning in matrix(c((la * (1 - la))/n, 0, 0, 0, mat[1, 1],
  mat[1, 2], 0, mat[2, 1], mat[2, 2]), nc = 3): partial argument match
  of 'nc' to 'ncol'
  gpd.rlci: no visible binding for global variable ‘xlow’
  gpd.rlci: no visible binding for global variable ‘xup’
  gpdf.gui : refresh: no visible binding for global variable
  ‘extRemesData’
  gpdf.gui : redolists: no visible binding for global variable
  ‘extRemesData’
  gpdf.gui : submit: no visible binding for global variable
  ‘cov.selected’
  gpdf.gui : submit: no visible binding for global variable ‘dat.cols’
  gpdf.gui : submit: no visible binding for global variable
  ‘sig.cov.cols’
  gpdf.gui : submit: no visible binding for global variable
  ‘gam.cov.cols’
  gpdf.gui : submit: no visible binding for global variable ‘sigma’
  gpdf.gui : submit: no visible binding for global variable ‘xi’
  gpdf.gui : submit: no visible binding for global variable ‘Dev’
  gpdf.gui : submit: no visible binding for global variable ‘fit.obj’
  gpdf.gui : submit: no visible binding for global variable ‘cov.names’
  gpdf.gui: warning in ls(all = TRUE, name = ".GlobalEnv"): partial
  argument match of 'all' to 'all.names'
  gpdf.gui: no visible binding for global variable ‘extRemesData’
  gpdfitrange.gui: warning in ls(all = TRUE, name = ".GlobalEnv"):
  partial argument match of 'all' to 'all.names'
  gpdfitrange.gui: no visible binding for global variable ‘extRemesData’
  gpdparamCI.gui : submit: no visible binding for global variable ‘fit’
  gpdparamCI.gui : submit: no visible binding for global variable ‘ci’
  gpdparamCI.gui: warning in ls(all = TRUE, name = ".GlobalEnv"): partial
  argument match of 'all' to 'all.names'
  gpdsim.gui : generate: no visible binding for global variable ‘gpd.sim’
  histogram.gui: warning in ls(all = TRUE, name = ".GlobalEnv"): partial
  argument match of 'all' to 'all.names'
  indicatorTransform.gui : refresh: no visible binding for global
  variable ‘extRemesData’
  indicatorTransform.gui : indicator.trans: no visible binding for global
  variable ‘cnames’
  indicatorTransform.gui : indicator.trans: no visible binding for global
  variable ‘cols.selected’
  indicatorTransform.gui : indicator.trans: no visible binding for global
  variable ‘newnames’
  indicatorTransform.gui: warning in ls(all = TRUE, name = ".GlobalEnv"):
  partial argument match of 'all' to 'all.names'
  indicatorTransform.gui: no visible binding for global variable
  ‘extRemesData’
  indicatorTransform.gui: no visible binding for global variable ‘dd’
  llhrt.gui : submit: no visible binding for global variable ‘n0’
  llhrt.gui : submit: no visible binding for global variable ‘n1’
  llhrt.gui : submit: no visible binding for global variable ‘dd’
  llhrt.gui : submit: no visible binding for global variable ‘out’
  llhrt.gui: warning in ls(all = TRUE, name = ".GlobalEnv"): partial
  argument match of 'all' to 'all.names'
  logdr.gui : refresh: no visible binding for global variable
  ‘extRemesData’
  logdr.gui : ldr.trans: no visible binding for global variable ‘cnames’
  logdr.gui : ldr.trans: no visible binding for global variable
  ‘cols.selected’
  logdr.gui: warning in ls(all = TRUE, name = ".GlobalEnv"): partial
  argument match of 'all' to 'all.names'
  logdr.gui: no visible binding for global variable ‘extRemesData’
  logdr.gui: no visible binding for global variable ‘dd’
  logtrans.gui : refresh: no visible binding for global variable
  ‘extRemesData’
  logtrans.gui : log.trans: no visible binding for global variable
  ‘cnames’
  logtrans.gui : log.trans: no visible binding for global variable
  ‘cols.selected’
  logtrans.gui: warning in ls(all = TRUE, name = ".GlobalEnv"): partial
  argument match of 'all' to 'all.names'
  logtrans.gui: no visible binding for global variable ‘extRemesData’
  logtrans.gui: no visible binding for global variable ‘dd’
  mrlplot.gui : submit: no visible binding for global variable ‘var.name’
  mrlplot.gui: warning in ls(all = TRUE, name = ".GlobalEnv"): partial
  argument match of 'all' to 'all.names'
  negtrans.gui : refresh: no visible binding for global variable
  ‘extRemesData’
  negtrans.gui : neg.trans: no visible binding for global variable
  ‘cnames’
  negtrans.gui : neg.trans: no visible binding for global variable
  ‘cols.selected’
  negtrans.gui: warning in ls(all = TRUE, name = ".GlobalEnv"): partial
  argument match of 'all' to 'all.names'
  negtrans.gui: no visible binding for global variable ‘extRemesData’
  negtrans.gui: no visible binding for global variable ‘dd’
  poisson.gui : submit: no visible binding for global variable ‘lambda’
  poisson.gui : submit: no visible binding for global variable ‘sigma2’
  poisson.gui : submit: no visible binding for global variable
  ‘chisqtest’
  poisson.gui : submit: no visible binding for global variable ‘m1’
  poisson.gui : submit: no visible binding for global variable ‘dd’
  poisson.gui : submit: no visible binding for global variable ‘cnames’
  poisson.gui : submit: warning in parse(tex = mod.fit.cmd): partial
  argument match of 'tex' to 'text'
  poisson.gui : submit: no visible binding for global variable ‘mod.fit’
  poisson.gui : refresh: no visible binding for global variable
  ‘extRemesData’
  poisson.gui : redolists: no visible binding for global variable
  ‘extRemesData’
  poisson.gui: warning in ls(all = TRUE, name = ".GlobalEnv"): partial
  argument match of 'all' to 'all.names'
  poisson.gui: no visible binding for global variable ‘extRemesData’
  ppfit.gui : refresh: no visible binding for global variable
  ‘extRemesData’
  ppfit.gui : redolists: no visible binding for global variable
  ‘extRemesData’
  ppfit.gui : submit: no visible binding for global variable
  ‘cov.selected’
  ppfit.gui : submit: no visible binding for global variable ‘dat.cols’
  ppfit.gui : submit: no visible binding for global variable ‘fit’
  ppfit.gui : submit: no visible binding for global variable ‘cov.names’
  ppfit.gui: warning in ls(all = TRUE, name = ".GlobalEnv"): partial
  argument match of 'all' to 'all.names'
  ppfit.gui: no visible binding for global variable ‘extRemesData’
  ppfitrange.gui: warning in ls(all = TRUE, name = ".GlobalEnv"): partial
  argument match of 'all' to 'all.names'
  ppfitrange.gui: no visible binding for global variable ‘extRemesData’
  return.level: warning in matrix(c((la * (1 - la))/n, 0, 0, 0, mat[1,
  1], mat[1, 2], 0, mat[2, 1], mat[2, 2]), nc = 3): partial argument
  match of 'nc' to 'ncol'
  rl.gpd.fit: warning in matrix(c((la * (1 - la))/n, 0, 0, 0, mat[1, 1],
  mat[1, 2], 0, mat[2, 1], mat[2, 2]), nc = 3): partial argument match
  of 'nc' to 'ncol'
  rlargf.gui : refresh: no visible binding for global variable
  ‘extRemesData’
  rlargf.gui : redolists: no visible binding for global variable
  ‘extRemesData’
  rlargf.gui : submit: no visible binding for global variable
  ‘cov.selected’
  rlargf.gui : submit: no visible binding for global variable ‘dat.cols’
  rlargf.gui : submit: no visible binding for global variable
  ‘mu.cov.cols’
  rlargf.gui : submit: no visible binding for global variable
  ‘sig.cov.cols’
  rlargf.gui : submit: no visible binding for global variable
  ‘gam.cov.cols’
  rlargf.gui : submit: no visible binding for global variable ‘fit’
  rlargf.gui : submit: no visible binding for global variable ‘cov.names’
  rlargf.gui: warning in ls(all = TRUE, name = ".GlobalEnv"): partial
  argument match of 'all' to 'all.names'
  rlargf.gui: no visible binding for global variable ‘extRemesData’
  rlplot: warning in matrix(c((la * (1 - la))/n, 0, 0, 0, mat[1, 1],
  mat[1, 2], 0, mat[2, 1], mat[2, 2]), nc = 3): partial argument match
  of 'nc' to 'ncol'
  rlplot.gui: warning in ls(all = TRUE, name = ".GlobalEnv"): partial
  argument match of 'all' to 'all.names'
  scatterplot.gui: warning in ls(all = TRUE, name = ".GlobalEnv"):
  partial argument match of 'all' to 'all.names'
  scrubber.gui : submit: no visible binding for global variable ‘dd’
  scrubber.gui : submit: no visible binding for global variable
  ‘tmp.names’
  scrubber.gui: warning in ls(all = TRUE, name = ".GlobalEnv"): partial
  argument match of 'all' to 'all.names'
  scrubber.gui: no visible binding for global variable ‘extRemesData’
  stats2: no visible global function definition for ‘cat.to.list’
  trigtrans.gui : refresh: no visible binding for global variable
  ‘extRemesData’
  trigtrans.gui : trig.trans: no visible binding for global variable
  ‘cnames’
  trigtrans.gui : trig.trans: no visible binding for global variable
  ‘cols.selected’
  trigtrans.gui: warning in ls(all = TRUE, name = ".GlobalEnv"): partial
  argument match of 'all' to 'all.names'
  trigtrans.gui: no visible binding for global variable ‘extRemesData’
  trigtrans.gui: no visible binding for global variable ‘dd’
• checking Rd files ... OK
• checking Rd metadata ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking contents of ‘data’ directory ... OK
• checking data for non-ASCII characters ... OK
• checking data for ASCII and uncompressed saves ... OK
• checking examples ... [5s/5s] OK
• checking PDF version of manual ... OK
  NOTE: There was 1 note.
  See
  ‘/home/hornik/tmp/R.check/r-devel/Work/PKGS/extRemes.Rcheck/00check.log’
  for details.