• using R version 2.11.0 Under development (unstable) (2009-11-24 r50554)
  • using session charset: UTF-8
  • checking for file 'coin/DESCRIPTION' ... OK
  • this is package 'coin' version '1.0-8'
  • checking package name space information ... OK
  • checking package dependencies ... OK
  • checking if this is a source package ... OK
  • checking for executable files ... OK
  • checking whether package 'coin' can be installed ... OK
  • checking package directory ... OK
  • checking for portable file names ... OK
  • checking for sufficient/correct file permissions ... OK
  • checking DESCRIPTION meta-information ... OK
  • checking top-level files ... OK
  • checking index information ... OK
  • checking package subdirectories ... OK
  • checking R files for non-ASCII characters ... OK
  • checking R files for syntax errors ... OK
  • checking whether the package can be loaded ... OK
  • checking whether the package can be loaded with stated dependencies ... OK
  • checking whether the package can be unloaded cleanly ... OK
  • checking whether the name space can be loaded with stated dependencies ... OK
  • checking whether the name space can be unloaded cleanly ... OK
  • checking for unstated dependencies in R code ... OK
  • checking S3 generic/method consistency ... OK
  • checking replacement functions ... OK
  • checking foreign function calls ... OK
  • checking R code for possible problems ... OK
  • checking Rd files ... OK
  • checking Rd metadata ... OK
  • checking Rd cross-references ... OK
  • checking for missing documentation entries ... OK
  • checking for code/documentation mismatches ... OK
  • checking Rd \usage sections ... OK
  • checking data for non-ASCII characters ... OK
  • checking line endings in C/C++/Fortran sources/headers ... OK
  • checking line endings in Makefiles ... OK
  • checking for portable compilation flags in Makevars ... OK
  • checking for portable use of $BLAS_LIBS ... OK
  • checking examples ... OK
  • checking differences from 'coin-Ex.Rout' to 'coin-Ex.Rout.save' ...
    4,5c4,5
    < > cleanEx()
    < > nameEx("ContingencyTests")
    ---
    > > assign(".oldNS", loadedNamespaces(), pos = 'CheckExEnv')
    > > cleanEx(); nameEx("ContingencyTests")
    142,143c142
    < > cleanEx()
    < > nameEx("IndependenceTest")
    ---
    > > cleanEx(); nameEx("IndependenceTest")
    203,204c202
    < > cleanEx()
    < > nameEx("LocationTests")
    ---
    > > cleanEx(); nameEx("LocationTests")
    376,380c374
    < > cleanEx()
    <
    < detaching 'package:multcomp'
    <
    < > nameEx("MarginalHomogeneityTest")
    ---
    > > cleanEx(); nameEx("MarginalHomogeneityTest")
    448,449c442
    < > cleanEx()
    < > nameEx("MaxstatTest")
    ---
    > > cleanEx(); nameEx("MaxstatTest")
    534,535c527
    < > cleanEx()
    < > nameEx("PermutationDistribution")
    ---
    > > cleanEx(); nameEx("PermutationDistribution")
    579,580c571
    < > cleanEx()
    < > nameEx("ScaleTests")
    ---
    > > cleanEx(); nameEx("ScaleTests")
    670,671c661
    < > cleanEx()
    < > nameEx("SpearmanTest")
    ---
    > > cleanEx(); nameEx("SpearmanTest")
    697,698c687
    < > cleanEx()
    < > nameEx("SurvTest")
    ---
    > > cleanEx(); nameEx("SurvTest")
    798,799c787
    < > cleanEx()
    < > nameEx("SymmetryTests")
    ---
    > > cleanEx(); nameEx("SymmetryTests")
    962,966c950
    < > cleanEx()
    <
    < detaching 'package:multcomp'
    <
    < > nameEx("Transformations")
    ---
    > > cleanEx(); nameEx("Transformations")
    1125,1126c1109
    < > cleanEx()
    < > nameEx("alpha")
    ---
    > > cleanEx(); nameEx("alpha")
    1151,1152c1134
    < > cleanEx()
    < > nameEx("alzheimer")
    ---
    > > cleanEx(); nameEx("alzheimer")
    1186,1187c1168
    < > cleanEx()
    < > nameEx("asat")
    ---
    > > cleanEx(); nameEx("asat")
    1214,1215c1195
    < > cleanEx()
    < > nameEx("expectation-methods")
    ---
    > > cleanEx(); nameEx("expectation-methods")
    1299,1300c1279
    < > cleanEx()
    < > nameEx("glioma")
    ---
    > > cleanEx(); nameEx("glioma")
    1420,1421c1399
    < > cleanEx()
    < > nameEx("hohnloser")
    ---
    > > cleanEx(); nameEx("hohnloser")
    1450,1451c1428
    < > cleanEx()
    < > nameEx("jobsatisfaction")
    ---
    > > cleanEx(); nameEx("jobsatisfaction")
    1478,1479c1455
    < > cleanEx()
    < > nameEx("mercuryfish")
    ---
    > > cleanEx(); nameEx("mercuryfish")
    1559,1560c1535
    < > cleanEx()
    < > nameEx("neuropathy")
    ---
    > > cleanEx(); nameEx("neuropathy")
    1609,1610c1584
    < > cleanEx()
    < > nameEx("ocarcinoma")
    ---
    > > cleanEx(); nameEx("ocarcinoma")
    1639,1640c1613
    < > cleanEx()
    < > nameEx("photocar")
    ---
    > > cleanEx(); nameEx("photocar")
    1687,1688c1660
    < > cleanEx()
    < > nameEx("pvalue-methods")
    ---
    > > cleanEx(); nameEx("pvalue-methods")
    1741,1742c1713
    < > cleanEx()
    < > nameEx("rotarod")
    ---
    > > cleanEx(); nameEx("rotarod")
    1789,1790c1760
    < > cleanEx()
    < > nameEx("sphase")
    ---
    > > cleanEx(); nameEx("sphase")
    1833,1834c1803
    < > cleanEx()
    < > nameEx("statistic-methods")
    ---
    > > cleanEx(); nameEx("statistic-methods")
    1891,1892c1860
    < > cleanEx()
    < > nameEx("treepipit")
    ---
    > > cleanEx(); nameEx("treepipit")
    OK
  • checking tests ... OK
  • checking package vignettes in 'inst/doc' ... OK
  • checking PDF version of manual ... OK