• using R Under development (unstable) (2012-02-23 r58468)
  • using platform: i686-pc-linux-gnu (32-bit)
  • using session charset: UTF-8
  • checking for file ‘citbcmst/DESCRIPTION’ ... OK
  • checking extension type ... Package
  • this is package ‘citbcmst’ version ‘1.0.2’
  • checking package dependencies ... OK
  • checking if this is a source package ... OK
  • checking if there is a namespace ... NOTE
    As from R 2.14.0 all packages need a namespace.
    One will be generated on installation, but it is better to handcraft a
    NAMESPACE file: R CMD build will produce a suitable starting point.
  • checking for executable files ... OK
  • checking whether package ‘citbcmst’ can be installed ... OK
  • checking installed package size ... OK
  • checking package directory ... OK
  • checking for portable file names ... OK
  • checking for sufficient/correct file permissions ... OK
  • checking DESCRIPTION meta-information ... OK
  • checking top-level files ... OK
  • checking index information ... OK
  • checking package subdirectories ... OK
  • checking R files for non-ASCII characters ... OK
  • checking R files for syntax errors ... OK
  • checking whether the package can be loaded ... OK
  • checking whether the package can be loaded with stated dependencies ... OK
  • checking whether the package can be unloaded cleanly ... OK
  • checking for unstated dependencies in R code ... OK
  • checking S3 generic/method consistency ... OK
  • checking replacement functions ... OK
  • checking foreign function calls ... OK
  • checking R code for possible problems ... NOTE
    cit.assignBcmst: no visible binding for global variable ‘citbcmst’
    cit.distToCentroids: warning in matrix(unlist(inf), nc = 1, dimnames =
    list(c("med", "max", "mad"), g)): partial argument match of 'nc' to
    'ncol'
  • checking Rd files ... OK
  • checking Rd metadata ... OK
  • checking Rd cross-references ... OK
  • checking for missing documentation entries ... OK
  • checking for code/documentation mismatches ... OK
  • checking Rd \usage sections ... OK
  • checking Rd contents ... OK
  • checking for unstated dependencies in examples ... OK
  • checking contents of ‘data’ directory ... OK
  • checking data for non-ASCII characters ... OK
  • checking data for ASCII and uncompressed saves ... WARNING

    Note: significantly better compression could be obtained
    by using R CMD build --resave-data
    old_size new_size compress
    citbcmst.RData 1.1Mb 1.0Mb xz
  • checking for left-overs from vignette generation ... WARNING
    file ‘inst/doc/Rplots.pdf’ will not be installed: please remove it
  • checking sizes of PDF files under ‘inst/doc’ ... OK
  • checking installed files from ‘inst/doc’ ... OK
  • checking examples ... [4s/4s] OK
  • checking for unstated dependencies in vignettes ... OK
  • checking package vignettes in ‘inst/doc’ ... OK
  • checking running R code from vignettes ... [13s/13s] OK
  • checking re-building of vignette PDFs ... [13s/13s] OK
  • checking PDF version of manual ... OK
    WARNING: There were 2 warnings.
    NOTE: There were 2 notes.
    See
    ‘/home/hornik/tmp/R.check/r-devel/Work/PKGS/citbcmst.Rcheck/00check.log’
    for details.