• using R version 2.11.0 Under development (unstable) (2009-11-06 r50317)
• using session charset: UTF-8
• checking for file 'apTreeshape/DESCRIPTION' ... OK
• this is package 'apTreeshape' version '1.4-1'
• package encoding: latin1
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking for executable files ... OK
• checking whether package 'apTreeshape' can be installed ... OK
• checking package directory ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking R files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... OK
• checking whether the package can be loaded with stated dependencies ... OK
• checking for unstated dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... OK
• checking Rd files ... OK
• checking Rd metadata ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking data for non-ASCII characters ... OK
• checking examples ... ERROR
  Running examples in 'apTreeshape-Ex.R' failed.
  The error most likely occurred in:
  
  > ### * aldous.test
  >
  > flush(stderr()); flush(stdout())
  >
  > ### Name: aldous.test
  > ### Title: Visualizing balance via scatter diagrams
  > ### Aliases: aldous.test
  > ### Keywords: htest
  >
  > ### ** Examples
  >
  > library(quantreg)
  > aldous.test(rbiased(2000, p=.5))
  > if(!inherits(try(open(url("http://www.google.com")), silent = TRUE), "try-error")) {
  +
  + t <- as.treeshape(dbtrees(db="pandit", tree=61, quiet=TRUE, class="phylo"),model="biased")
  + aldous.test(t, xmin=10)
  +
  + t <-as.treeshape(dbtrees(db="pandit", tree=120, quiet=TRUE, class="phylo"),model="yule")
  + aldous.test(t)
  +
  + ## Test with a huge balanced tree:
  + aldous.test(rbiased(2000, p=.5))
  + }
  Error in UseMethod("as.treeshape") :
  no applicable method for 'as.treeshape' applied to an object of class "NULL"
  Calls: as.treeshape
  Execution halted