• using R Under development (unstable) (2012-02-23 r58468)
• using platform: i686-pc-linux-gnu (32-bit)
• using session charset: UTF-8
• checking for file ‘Renext/DESCRIPTION’ ... OK
• checking extension type ... Package
• this is package ‘Renext’ version ‘1.0-0’
• checking package namespace information ... OK
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking if there is a namespace ... OK
• checking for executable files ... OK
• checking whether package ‘Renext’ can be installed ... OK
• checking installed package size ... OK
• checking package directory ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking R files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... OK
• checking whether the package can be loaded with stated dependencies ... OK
• checking whether the package can be unloaded cleanly ... OK
• checking whether the namespace can be loaded with stated dependencies ... OK
• checking whether the namespace can be unloaded cleanly ... OK
• checking for unstated dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... NOTE
  Hmixexp2: warning in pexp(x, rate = rate1, log = FALSE): partial
  argument match of 'log' to 'log.p'
  Hmixexp2: warning in pexp(x, rate = rate2, log = FALSE): partial
  argument match of 'log' to 'log.p'
  expplot: warning in formatC(1 - probs, format = "f", dig = 2): partial
  argument match of 'dig' to 'digits'
  expplot: warning in formatC(rate, format = "f", dig = 2): partial
  argument match of 'dig' to 'digits'
  hmixexp2: warning in pexp(x, rate = rate1, log = FALSE): partial
  argument match of 'log' to 'log.p'
  hmixexp2: warning in pexp(x, rate = rate2, log = FALSE): partial
  argument match of 'log' to 'log.p'
  pmixexp2: warning in pexp(q, rate = rate1, log = FALSE): partial
  argument match of 'log' to 'log.p'
  pmixexp2: warning in pexp(q, rate = rate2, log = FALSE): partial
  argument match of 'log' to 'log.p'
  readXML: warning in difftime(noskip$end, noskip$start, unit = "day"):
  partial argument match of 'unit' to 'units'
  readXML: warning in difftime(OTinfo$end, OTinfo$start, unit = "day"):
  partial argument match of 'unit' to 'units'
  weibplot: warning in formatC(1 - probs, format = "f", dig = 2): partial
  argument match of 'dig' to 'digits'
  weibplot: warning in formatC(shape, format = "f", dig = 2): partial
  argument match of 'dig' to 'digits'
  weibplot: warning in formatC(scale, format = "f", dig = 2): partial
  argument match of 'dig' to 'digits'
• checking Rd files ... OK
• checking Rd metadata ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... NOTE
  S3 methods shown with full name in documentation object 'plot.Rendata':
  ‘plot.Rendata’
  
  The \usage entries for S3 methods should use the \method markup and not
  their full name.
  See the chapter ‘Writing R documentation files’ in the ‘Writing R
  Extensions’ manual.
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking contents of ‘data’ directory ... OK
• checking data for non-ASCII characters ... OK
• checking data for ASCII and uncompressed saves ... OK
• checking sizes of PDF files under ‘inst/doc’ ... OK
• checking installed files from ‘inst/doc’ ... NOTE
  The following directories should probably not be installed:
  ‘images’
  
  Consider the use of a .Rinstignore file: see ‘Writing R Extensions’,
  or move the vignette sources from ‘inst/doc’ to ‘vignettes’.
• checking examples ... [2s/2s] OK
• checking for unstated dependencies in tests ... OK
• checking tests ... [7s/7s] OK
  Running ‘Unobserved.R’ [0s/0s]
  Running ‘qmixexp2.R’ [6s/6s]
• checking for unstated dependencies in vignettes ... OK
• checking package vignettes in ‘inst/doc’ ... OK
• checking running R code from vignettes ... [1s/1s] OK
• checking re-building of vignette PDFs ... [4s/5s] OK
• checking PDF version of manual ... OK
  NOTE: There were 3 notes.
  See
  ‘/home/hornik/tmp/R.check/r-devel/Work/PKGS/Renext.Rcheck/00check.log’
  for details.