- using R Under development (unstable) (2012-02-23 r58468)
- using platform: i686-pc-linux-gnu (32-bit)
- using session charset: UTF-8
- checking for file ‘Modalclust/DESCRIPTION’ ... OK
- checking extension type ... Package
- this is package ‘Modalclust’ version ‘0.2’
- checking package dependencies ... OK
- checking if this is a source package ... OK
- checking if there is a namespace ... NOTE
As from R 2.14.0 all packages need a namespace.
One will be generated on installation, but it is better to handcraft a
NAMESPACE file: R CMD build will produce a suitable starting point.
- checking for executable files ... OK
- checking whether package ‘Modalclust’ can be installed ... OK
- checking installed package size ... OK
- checking package directory ... OK
- checking for portable file names ... OK
- checking for sufficient/correct file permissions ... OK
- checking DESCRIPTION meta-information ... OK
- checking top-level files ... OK
- checking index information ... OK
- checking package subdirectories ... OK
- checking R files for non-ASCII characters ... OK
- checking R files for syntax errors ... OK
- checking whether the package can be loaded ... OK
- checking whether the package can be loaded with stated dependencies ... OK
- checking whether the package can be unloaded cleanly ... OK
- checking for unstated dependencies in R code ... OK
- checking S3 generic/method consistency ... OK
- checking replacement functions ... OK
- checking foreign function calls ... OK
- checking R code for possible problems ... OK
- checking Rd files ... OK
- checking Rd metadata ... OK
- checking Rd cross-references ... OK
- checking for missing documentation entries ... OK
- checking for code/documentation mismatches ... OK
- checking Rd \usage sections ... OK
- checking Rd contents ... OK
- checking for unstated dependencies in examples ... OK
- checking contents of ‘data’ directory ... OK
- checking data for non-ASCII characters ... OK
- checking data for ASCII and uncompressed saves ... OK
- checking sizes of PDF files under ‘inst/doc’ ... OK
- checking installed files from ‘inst/doc’ ... OK
- checking examples ... ERROR
Running examples in ‘Modalclust-Ex.R’ failed
The error most likely occurred in:
> ### Name: contour.hmac
> ### Title: Plot clusters with different colors for two dimensional data
> ### overlayed on the contours of the original data.
> ### Aliases: contour.hmac contour
> ### Keywords: cluster, hierarchical, nested, modal
>
> ### ** Examples
>
> data(disc2d.hmac)
> # disc2d.hmac is the output of phmac(disc2d,npart=1)
>
> contour.hmac(disc2d.hmac,level=3,col=gray(0.7))
Loading required package: MASS
>
> # Provide contour line at probability density 0.05.
> contour(disc2d.hmac,n.cluster=2,prob=0.05)
The level at which there are 2 clusters is 3
>
> # Plot using smooth scatter plot.
> contour.hmac(disc2d.hmac,n.cluster=2,smoothplot=TRUE)
The level at which there are 2 clusters is 3
Error in loadNamespace(name) : there is no package called ‘KernSmooth’
Calls: contour.hmac ... tryCatch -> tryCatchList -> tryCatchOne -> <Anonymous>
Execution halted