• using R Under development (unstable) (2012-02-06 r58287)
• using platform: i686-pc-linux-gnu (32-bit)
• using session charset: UTF-8
• checking for file ‘BMA/DESCRIPTION’ ... OK
• this is package ‘BMA’ version ‘3.14.1’
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking if there is a namespace ... NOTE
  As from R 2.14.0 all packages need a namespace.
  One will be generated on installation, but it is better to handcraft a
  NAMESPACE file: R CMD build will produce a suitable starting point.
• checking for executable files ... OK
• checking whether package ‘BMA’ can be installed ... OK
• checking installed package size ... OK
• checking package directory ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking R files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... OK
• checking whether the package can be loaded with stated dependencies ... OK
• checking whether the package can be unloaded cleanly ... OK
• checking for unstated dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... NOTE
  bicreg: warning in lm(y ~ 1, w = wt): partial argument match of 'w' to
  'weights'
  bicreg: warning in lm(y ~ . - wt, data = x.lm, w = wt): partial
  argument match of 'w' to 'weights'
  bicreg: warning in lsfit(rep(1, length(y)), y, wt = wt, int = FALSE):
  partial argument match of 'int' to 'intercept'
  iBMA.glm.data.frame : sortX: no visible binding for '<<-' assignment to
  ‘nastyHack_____glm.family’
  iBMA.glm.data.frame : sortX: no visible binding for '<<-' assignment to
  ‘nastyHack_____x.df’
  iBMA.glm.data.frame : sortX: no visible binding for global variable
  ‘nastyHack_____glm.family’
  iBMA.glm.data.frame : sortX: no visible binding for global variable
  ‘nastyHack_____x.df’
  iBMA.glm.matrix : sortX: no visible binding for '<<-' assignment to
  ‘nastyHack_____glm.family’
  iBMA.glm.matrix : sortX: no visible binding for '<<-' assignment to
  ‘nastyHack_____x.df’
  iBMA.glm.matrix : sortX: no visible binding for global variable
  ‘nastyHack_____glm.family’
  iBMA.glm.matrix : sortX: no visible binding for global variable
  ‘nastyHack_____x.df’
  iBMA.surv.data.frame : sortX: no visible binding for '<<-' assignment
  to ‘nastyHack_____x.df’
  iBMA.surv.data.frame : sortX: no visible binding for global variable
  ‘nastyHack_____x.df’
  iBMA.surv.matrix : sortX: no visible binding for '<<-' assignment to
  ‘nastyHack_____x.df’
  iBMA.surv.matrix : sortX: no visible binding for global variable
  ‘nastyHack_____x.df’
• checking Rd files ... NOTE
  prepare_Rd: summary.iBMA.Rd:44-46: Dropping empty section \examples
• checking Rd metadata ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking contents of ‘data’ directory ... OK
• checking data for non-ASCII characters ... OK
• checking data for ASCII and uncompressed saves ... OK
• checking line endings in C/C++/Fortran sources/headers ... OK
• checking line endings in Makefiles ... OK
• checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
• checking compiled code ... OK
• checking examples ... [76s/77s] OK
• checking PDF version of manual ... OK
  NOTE: There were 3 notes.
  See
  ‘/home/hornik/tmp/R.check/r-devel/Work/PKGS/BMA.Rcheck/00check.log’
  for details.