Running ‘testthat.R’ [20m/31m]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
  > library(testthat)
  > library(phacking)
  > 
  > test_check("phacking")
  
  SAMPLING FOR MODEL 'phacking_rtma' NOW (CHAIN 1).
  Chain 1: 
  Chain 1: Gradient evaluation took 0.000307 seconds
  Chain 1: 1000 transitions using 10 leapfrog steps per transition would take 3.07 seconds.
  Chain 1: Adjust your expectations accordingly!
  Chain 1: 
  Chain 1: 
  Chain 1: Iteration:    1 / 2000 [  0%]  (Warmup)
  Chain 1: Iteration:  200 / 2000 [ 10%]  (Warmup)
  Chain 1: Iteration:  400 / 2000 [ 20%]  (Warmup)
  Chain 1: Iteration:  600 / 2000 [ 30%]  (Warmup)
  Chain 1: Iteration:  800 / 2000 [ 40%]  (Warmup)
  Chain 1: Iteration: 1000 / 2000 [ 50%]  (Warmup)
  Chain 1: Iteration: 1001 / 2000 [ 50%]  (Sampling)
  Chain 1: Iteration: 1200 / 2000 [ 60%]  (Sampling)
  Chain 1: Iteration: 1400 / 2000 [ 70%]  (Sampling)
  Chain 1: Iteration: 1600 / 2000 [ 80%]  (Sampling)
  Chain 1: Iteration: 1800 / 2000 [ 90%]  (Sampling)
  Chain 1: Iteration: 2000 / 2000 [100%]  (Sampling)
  Chain 1: 
  Chain 1:  Elapsed Time: 1.065 seconds (Warm-up)
  Chain 1:                0.984 seconds (Sampling)
  Chain 1:                2.049 seconds (Total)
  Chain 1: 
  
  SAMPLING FOR MODEL 'phacking_rtma' NOW (CHAIN 2).
  Chain 2: 
  Chain 2: Gradient evaluation took 0.00018 seconds
  Chain 2: 1000 transitions using 10 leapfrog steps per transition would take 1.8 seconds.
  Chain 2: Adjust your expectations accordingly!
  Chain 2: 
  Chain 2: 
  Chain 2: Iteration:    1 / 2000 [  0%]  (Warmup)
  Chain 2: Iteration:  200 / 2000 [ 10%]  (Warmup)
  Chain 2: Iteration:  400 / 2000 [ 20%]  (Warmup)
  Chain 2: Iteration:  600 / 2000 [ 30%]  (Warmup)
  Chain 2: Iteration:  800 / 2000 [ 40%]  (Warmup)
  Chain 2: Iteration: 1000 / 2000 [ 50%]  (Warmup)
  Chain 2: Iteration: 1001 / 2000 [ 50%]  (Sampling)
  Chain 2: Iteration: 1200 / 2000 [ 60%]  (Sampling)
  Chain 2: Iteration: 1400 / 2000 [ 70%]  (Sampling)
  Chain 2: Iteration: 1600 / 2000 [ 80%]  (Sampling)
  Chain 2: Iteration: 1800 / 2000 [ 90%]  (Sampling)
  Chain 2: Iteration: 2000 / 2000 [100%]  (Sampling)
  Chain 2: 
  Chain 2:  Elapsed Time: 1.038 seconds (Warm-up)
  Chain 2:                1.015 seconds (Sampling)
  Chain 2:                2.053 seconds (Total)
  Chain 2: 
  
  SAMPLING FOR MODEL 'phacking_rtma' NOW (CHAIN 3).
  Chain 3: 
  Chain 3: Gradient evaluation took 0.000184 seconds
  Chain 3: 1000 transitions using 10 leapfrog steps per transition would take 1.84 seconds.
  Chain 3: Adjust your expectations accordingly!
  Chain 3: 
  Chain 3: 
  Chain 3: Iteration:    1 / 2000 [  0%]  (Warmup)
  Chain 3: Iteration:  200 / 2000 [ 10%]  (Warmup)
  Chain 3: Iteration:  400 / 2000 [ 20%]  (Warmup)
  Chain 3: Iteration:  600 / 2000 [ 30%]  (Warmup)
  Chain 3: Iteration:  800 / 2000 [ 40%]  (Warmup)
  Chain 3: Iteration: 1000 / 2000 [ 50%]  (Warmup)
  Chain 3: Iteration: 1001 / 2000 [ 50%]  (Sampling)
  Chain 3: Iteration: 1200 / 2000 [ 60%]  (Sampling)
  Chain 3: Iteration: 1400 / 2000 [ 70%]  (Sampling)
  Chain 3: Iteration: 1600 / 2000 [ 80%]  (Sampling)
  Chain 3: Iteration: 1800 / 2000 [ 90%]  (Sampling)
  Chain 3: Iteration: 2000 / 2000 [100%]  (Sampling)
  Chain 3: 
  Chain 3:  Elapsed Time: 1.249 seconds (Warm-up)
  Chain 3:                0.846 seconds (Sampling)
  Chain 3:                2.095 seconds (Total)
  Chain 3: 
  
  SAMPLING FOR MODEL 'phacking_rtma' NOW (CHAIN 4).
  Chain 4: 
  Chain 4: Gradient evaluation took 0.000179 seconds
  Chain 4: 1000 transitions using 10 leapfrog steps per transition would take 1.79 seconds.
  Chain 4: Adjust your expectations accordingly!
  Chain 4: 
  Chain 4: 
  Chain 4: Iteration:    1 / 2000 [  0%]  (Warmup)
  Chain 4: Iteration:  200 / 2000 [ 10%]  (Warmup)
  Chain 4: Iteration:  400 / 2000 [ 20%]  (Warmup)
  Chain 4: Iteration:  600 / 2000 [ 30%]  (Warmup)
  Chain 4: Iteration:  800 / 2000 [ 40%]  (Warmup)
  Chain 4: Iteration: 1000 / 2000 [ 50%]  (Warmup)
  Chain 4: Iteration: 1001 / 2000 [ 50%]  (Sampling)
  Chain 4: Iteration: 1200 / 2000 [ 60%]  (Sampling)
  Chain 4: Iteration: 1400 / 2000 [ 70%]  (Sampling)
  Chain 4: Iteration: 1600 / 2000 [ 80%]  (Sampling)
  Chain 4: Iteration: 1800 / 2000 [ 90%]  (Sampling)
  Chain 4: Iteration: 2000 / 2000 [100%]  (Sampling)
  Chain 4: 
  Chain 4:  Elapsed Time: 0.868 seconds (Warm-up)
  Chain 4:                0.949 seconds (Sampling)
  Chain 4:                1.817 seconds (Total)
  Chain 4: 
  
  SAMPLING FOR MODEL 'phacking_rtma' NOW (CHAIN 1).
  Chain 1: 
  Chain 1: Gradient evaluation took 0.000232 seconds
  Chain 1: 1000 transitions using 10 leapfrog steps per transition would take 2.32 seconds.
  Chain 1: Adjust your expectations accordingly!
  Chain 1: 
  Chain 1: 
  Chain 1: Iteration:    1 / 2000 [  0%]  (Warmup)
  Chain 1: Iteration:  200 / 2000 [ 10%]  (Warmup)
  Chain 1: Iteration:  400 / 2000 [ 20%]  (Warmup)
  Chain 1: Iteration:  600 / 2000 [ 30%]  (Warmup)
  Chain 1: Iteration:  800 / 2000 [ 40%]  (Warmup)
  Chain 1: Iteration: 1000 / 2000 [ 50%]  (Warmup)
  Chain 1: Iteration: 1001 / 2000 [ 50%]  (Sampling)
  Chain 1: Iteration: 1200 / 2000 [ 60%]  (Sampling)
  Chain 1: Iteration: 1400 / 2000 [ 70%]  (Sampling)
  Chain 1: Iteration: 1600 / 2000 [ 80%]  (Sampling)
  Chain 1: Iteration: 1800 / 2000 [ 90%]  (Sampling)
  Chain 1: Iteration: 2000 / 2000 [100%]  (Sampling)
  Chain 1: 
  Chain 1:  Elapsed Time: 2.71 seconds (Warm-up)
  Chain 1:                1.73 seconds (Sampling)
  Chain 1:                4.44 seconds (Total)
  Chain 1: 
  
  SAMPLING FOR MODEL 'phacking_rtma' NOW (CHAIN 2).
  Chain 2: 
  Chain 2: Gradient evaluation took 0.000172 seconds
  Chain 2: 1000 transitions using 10 leapfrog steps per transition would take 1.72 seconds.
  Chain 2: Adjust your expectations accordingly!
  Chain 2: 
  Chain 2: 
  Chain 2: Iteration:    1 / 2000 [  0%]  (Warmup)
  Chain 2: Iteration:  200 / 2000 [ 10%]  (Warmup)
  Chain 2: Iteration:  400 / 2000 [ 20%]  (Warmup)
  Chain 2: Iteration:  600 / 2000 [ 30%]  (Warmup)
  Chain 2: Iteration:  800 / 2000 [ 40%]  (Warmup)
  Chain 2: Iteration: 1000 / 2000 [ 50%]  (Warmup)
  Chain 2: Iteration: 1001 / 2000 [ 50%]  (Sampling)
  Chain 2: Iteration: 1200 / 2000 [ 60%]  (Sampling)
  Chain 2: Iteration: 1400 / 2000 [ 70%]  (Sampling)
  Chain 2: Iteration: 1600 / 2000 [ 80%]  (Sampling)
  Chain 2: Iteration: 1800 / 2000 [ 90%]  (Sampling)
  Chain 2: Iteration: 2000 / 2000 [100%]  (Sampling)
  Chain 2: 
  Chain 2:  Elapsed Time: 2.755 seconds (Warm-up)
  Chain 2:                2.049 seconds (Sampling)
  Chain 2:                4.804 seconds (Total)
  Chain 2: 
  
  SAMPLING FOR MODEL 'phacking_rtma' NOW (CHAIN 3).
  Chain 3: 
  Chain 3: Gradient evaluation took 0.000199 seconds
  Chain 3: 1000 transitions using 10 leapfrog steps per transition would take 1.99 seconds.
  Chain 3: Adjust your expectations accordingly!
  Chain 3: 
  Chain 3: 
  Chain 3: Iteration:    1 / 2000 [  0%]  (Warmup)
  Chain 3: Iteration:  200 / 2000 [ 10%]  (Warmup)
  Chain 3: Iteration:  400 / 2000 [ 20%]  (Warmup)
  Chain 3: Iteration:  600 / 2000 [ 30%]  (Warmup)
  Chain 3: Iteration:  800 / 2000 [ 40%]  (Warmup)
  Chain 3: Iteration: 1000 / 2000 [ 50%]  (Warmup)
  Chain 3: Iteration: 1001 / 2000 [ 50%]  (Sampling)
  Chain 3: Iteration: 1200 / 2000 [ 60%]  (Sampling)
  Chain 3: Iteration: 1400 / 2000 [ 70%]  (Sampling)
  Chain 3: Iteration: 1600 / 2000 [ 80%]  (Sampling)
  Chain 3: Iteration: 1800 / 2000 [ 90%]  (Sampling)
  Chain 3: Iteration: 2000 / 2000 [100%]  (Sampling)
  Chain 3: 
  Chain 3:  Elapsed Time: 2.661 seconds (Warm-up)
  Chain 3:                1.906 seconds (Sampling)
  Chain 3:                4.567 seconds (Total)
  Chain 3: 
  
  SAMPLING FOR MODEL 'phacking_rtma' NOW (CHAIN 4).
  Chain 4: 
  Chain 4: Gradient evaluation took 0.000175 seconds
  Chain 4: 1000 transitions using 10 leapfrog steps per transition would take 1.75 seconds.
  Chain 4: Adjust your expectations accordingly!
  Chain 4: 
  Chain 4: 
  Chain 4: Iteration:    1 / 2000 [  0%]  (Warmup)
  Chain 4: Iteration:  200 / 2000 [ 10%]  (Warmup)
  Chain 4: Iteration:  400 / 2000 [ 20%]  (Warmup)
  Chain 4: Iteration:  600 / 2000 [ 30%]  (Warmup)
  Chain 4: Iteration:  800 / 2000 [ 40%]  (Warmup)
  Chain 4: Iteration: 1000 / 2000 [ 50%]  (Warmup)
  Chain 4: Iteration: 1001 / 2000 [ 50%]  (Sampling)
  Chain 4: Iteration: 1200 / 2000 [ 60%]  (Sampling)
  Chain 4: Iteration: 1400 / 2000 [ 70%]  (Sampling)
  Chain 4: Iteration: 1600 / 2000 [ 80%]  (Sampling)
  Chain 4: Iteration: 1800 / 2000 [ 90%]  (Sampling)
  Chain 4: Iteration: 2000 / 2000 [100%]  (Sampling)
  Chain 4: 
  Chain 4:  Elapsed Time: 2.583 seconds (Warm-up)
  Chain 4:                1.851 seconds (Sampling)
  Chain 4:                4.434 seconds (Total)
  Chain 4: 
  
  SAMPLING FOR MODEL 'phacking_rtma' NOW (CHAIN 1).
  Chain 1: 
  Chain 1: Gradient evaluation took 2.9e-05 seconds
  Chain 1: 1000 transitions using 10 leapfrog steps per transition would take 0.29 seconds.
  Chain 1: Adjust your expectations accordingly!
  Chain 1: 
  Chain 1: 
  Chain 1: Iteration:    1 / 2000 [  0%]  (Warmup)
  Chain 1: Iteration:  200 / 2000 [ 10%]  (Warmup)
  Chain 1: Iteration:  400 / 2000 [ 20%]  (Warmup)
  Chain 1: Iteration:  600 / 2000 [ 30%]  (Warmup)
  Chain 1: Iteration:  800 / 2000 [ 40%]  (Warmup)
  Chain 1: Iteration: 1000 / 2000 [ 50%]  (Warmup)
  Chain 1: Iteration: 1001 / 2000 [ 50%]  (Sampling)
  Chain 1: Iteration: 1200 / 2000 [ 60%]  (Sampling)
  Chain 1: Iteration: 1400 / 2000 [ 70%]  (Sampling)
  Chain 1: Iteration: 1600 / 2000 [ 80%]  (Sampling)
  Chain 1: Iteration: 1800 / 2000 [ 90%]  (Sampling)
  Chain 1: Iteration: 2000 / 2000 [100%]  (Sampling)
  Chain 1: 
  Chain 1:  Elapsed Time: 0.908 seconds (Warm-up)
  Chain 1:                5.637 seconds (Sampling)
  Chain 1:                6.545 seconds (Total)
  Chain 1: 
  
  SAMPLING FOR MODEL 'phacking_rtma' NOW (CHAIN 2).
  Chain 2: 
  Chain 2: Gradient evaluation took 3e-05 seconds
  Chain 2: 1000 transitions using 10 leapfrog steps per transition would take 0.3 seconds.
  Chain 2: Adjust your expectations accordingly!
  Chain 2: 
  Chain 2: 
  Chain 2: Iteration:    1 / 2000 [  0%]  (Warmup)
  Chain 2: Iteration:  200 / 2000 [ 10%]  (Warmup)
  Chain 2: Iteration:  400 / 2000 [ 20%]  (Warmup)
  Chain 2: Iteration:  600 / 2000 [ 30%]  (Warmup)
  Chain 2: Iteration:  800 / 2000 [ 40%]  (Warmup)
  Chain 2: Iteration: 1000 / 2000 [ 50%]  (Warmup)
  Chain 2: Iteration: 1001 / 2000 [ 50%]  (Sampling)
  Chain 2: Iteration: 1200 / 2000 [ 60%]  (Sampling)
  Chain 2: Iteration: 1400 / 2000 [ 70%]  (Sampling)
  Chain 2: Iteration: 1600 / 2000 [ 80%]  (Sampling)
  Chain 2: Iteration: 1800 / 2000 [ 90%]  (Sampling)
  Chain 2: Iteration: 2000 / 2000 [100%]  (Sampling)
  Chain 2: 
  Chain 2:  Elapsed Time: 72.806 seconds (Warm-up)
  Chain 2:                0.232 seconds (Sampling)
  Chain 2:                73.038 seconds (Total)
  Chain 2: 
  
  SAMPLING FOR MODEL 'phacking_rtma' NOW (CHAIN 3).
  Chain 3: 
  Chain 3: Gradient evaluation took 2.1e-05 seconds
  Chain 3: 1000 transitions using 10 leapfrog steps per transition would take 0.21 seconds.
  Chain 3: Adjust your expectations accordingly!
  Chain 3: 
  Chain 3: 
  Chain 3: Iteration:    1 / 2000 [  0%]  (Warmup)
  Chain 3: Iteration:  200 / 2000 [ 10%]  (Warmup)
  Chain 3: Iteration:  400 / 2000 [ 20%]  (Warmup)
  Chain 3: Iteration:  600 / 2000 [ 30%]  (Warmup)
  Chain 3: Iteration:  800 / 2000 [ 40%]  (Warmup)
  Chain 3: Iteration: 1000 / 2000 [ 50%]  (Warmup)
  Chain 3: Iteration: 1001 / 2000 [ 50%]  (Sampling)
  Chain 3: Iteration: 1200 / 2000 [ 60%]  (Sampling)
  Chain 3: Iteration: 1400 / 2000 [ 70%]  (Sampling)
  Chain 3: Iteration: 1600 / 2000 [ 80%]  (Sampling)
  Chain 3: Iteration: 1800 / 2000 [ 90%]  (Sampling)
  Chain 3: Iteration: 2000 / 2000 [100%]  (Sampling)
  Chain 3: 
  Chain 3:  Elapsed Time: 0.303 seconds (Warm-up)
  Chain 3:                0.354 seconds (Sampling)
  Chain 3:                0.657 seconds (Total)
  Chain 3: 
  
  SAMPLING FOR MODEL 'phacking_rtma' NOW (CHAIN 4).
  Chain 4: 
  Chain 4: Gradient evaluation took 1.6e-05 seconds
  Chain 4: 1000 transitions using 10 leapfrog steps per transition would take 0.16 seconds.
  Chain 4: Adjust your expectations accordingly!
  Chain 4: 
  Chain 4: 
  Chain 4: Iteration:    1 / 2000 [  0%]  (Warmup)
  Chain 4: Iteration:  200 / 2000 [ 10%]  (Warmup)
  Chain 4: Iteration:  400 / 2000 [ 20%]  (Warmup)
  Chain 4: Iteration:  600 / 2000 [ 30%]  (Warmup)
  Chain 4: Iteration:  800 / 2000 [ 40%]  (Warmup)
  Killed